RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 LIMS2Q7Z4I7 341 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 BMP8AQ7Z5Y6 402 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 SLC9A9Q8IVB4 645 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 CD302Q8IX05 232 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 ZC3H3Q8IXZ2 948 aaKnown RBP9.33□□□□□ -0.92
SNCA-211ENST00000508895 PDCL2Q8N4E4 241 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 TMEM105Q8N8V8 129 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 XXYLT1Q8NBI6 393 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 GPR152Q8TDT2 470 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 RSPRY1Q96DX4 576 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 MCRS1Q96EZ8 462 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 KXD1Q9BQD3 176 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 CORO1BQ9BR76 489 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 ZCWPW1Q9H0M4 648 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 INTS13Q9NVM9 706 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 DMAC2Q9NW81 257 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 AFF4Q9UHB7 1163 aaKnown RBP9.33□□□□□ -0.92
SNCA-211ENST00000508895 CTNND2Q9UQB3 1225 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 NUMBLQ9Y6R0 609 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 PKD1L2Q7Z442 2459 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 ATG2BQ96BY7 2078 aa9.33□□□□□ -0.92
SNCA-211ENST00000508895 HELZP42694 1942 aaKnown RBP9.33□□□□□ -0.92
SNCA-211ENST00000508895 KPNA7A9QM74 516 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 H7C4K7 107 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 PRRG1O14668 218 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 CALUO43852 315 aaPredicted RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 VNN1O95497 513 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 LDHAP00338 332 aaKnown RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 CFHP08603 1231 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 POU2F2P09086 479 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 ATF6P18850 670 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 NR2F2P24468 414 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 CCNE1P24864 410 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 LMO2P25791 158 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 GPC5P78333 572 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 GPR17Q13304 367 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 TDGQ13569 410 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 SOWAHAQ2M3V2 549 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 KLHL40Q2TBA0 621 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 EDRF1Q3B7T1 1238 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 PABPC1LQ4VXU2 614 aaKnown RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 SLC39A12Q504Y0 691 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 TANGO2Q6ICL3 276 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 KLHL10Q6JEL2 608 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 TTI2Q6NXR4 508 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 CAVIN1Q6NZI2 390 aaKnown RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 CYP26C1Q6V0L0 522 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 GAREM2Q75VX8 874 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 CSGALNACT2Q8N6G5 542 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 APPL2Q8NEU8 664 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 SHKBP1Q8TBC3 707 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 KBTBD7Q8WVZ9 684 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 MFSD14AQ96MC6 490 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 LRRC3BQ96PB8 259 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 MED15Q96RN5 788 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 MKNK1Q9BUB5 465 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 GTPBP4Q9BZE4 634 aaKnown RBP9.32□□□□□ -0.92
SNCA-211ENST00000508895 TMEM30AQ9NV96 361 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 CDH7Q9ULB5 785 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 DUSP12Q9UNI6 340 aa9.32□□□□□ -0.92
SNCA-211ENST00000508895 MIA3Q5JRA6 1907 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 ZNF233A6NK53 670 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 OR6C75A6NL08 312 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 LRRIQ3A6PVS8 624 aaPredicted RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 PSMA7O14818 248 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 XPOTO43592 962 aaKnown RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 EXOC3O60645 756 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 AKAP3O75969 853 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 KRT19P08727 400 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 DLATP10515 647 aaKnown RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 VIPR2P41587 438 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 LRRC63Q05C16 580 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 TCF15Q12870 199 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 PAK1Q13153 545 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 STIM1Q13586 685 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 MTMR3Q13615 1198 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 PSMD6Q15008 389 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 TEAD2Q15562 447 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 FAM78AQ5JUQ0 283 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 TPGS2Q68CL5 300 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 ANKRD40Q6AI12 368 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 TRAPPC11Q7Z392 1133 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 TMEM150AQ86TG1 271 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 PLCD3Q8N3E9 789 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 FBXL6Q8N531 539 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 GIPC2Q8TF65 315 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 NELFBQ8WX92 580 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 CCDC127Q96BQ5 260 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 ACSF2Q96CM8 615 aaPredicted RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 EEF2KMTQ96G04 330 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 DHTKD1Q96HY7 919 aaPredicted RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 TSPAN18Q96SJ8 248 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 CGRRF1Q99675 332 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 DUSP9Q99956 384 aaKnown RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 MRPL45Q9BRJ2 306 aaKnown RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 SDCBP2Q9H190 292 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 XYLT2Q9H1B5 865 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 IL21Q9HBE4 155 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms