RNA–Protein interactions for RNA: ENST00000508657.5

KLHL3-209, Transcript of kelch like family member 3, humanhuman

TSL 1 (best) BASIC

Gene KLHL3, Length 6,981 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL3-209ENST00000508657 CDC42BPGQ6DT37 1551 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 KLRK1P26718 216 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 CCT5P48643 541 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 RIN3Q8TB24 985 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.39□□□□□ -0.91
KLHL3-209ENST00000508657 SUSD6Q92537 303 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 KLHL29Q96CT2 875 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 ZDHHC6Q9H6R6 413 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 SPG21Q9NZD8 308 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 IL1RAPL1Q9NZN1 696 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 APOBEC2Q9Y235 224 aaKnown RBP9.39□□□□□ -0.91
KLHL3-209ENST00000508657 TRDMT1O14717 391 aaKnown RBP9.39□□□□□ -0.91
KLHL3-209ENST00000508657 FDX1P10109 184 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 ZNF280DQ6N043 979 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 DET1Q7L5Y6 550 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 MKNK1Q9BUB5 465 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 MRPL17Q9NRX2 175 aaKnown RBP9.39□□□□□ -0.91
KLHL3-209ENST00000508657 PADI4Q9UM07 663 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 NPC1L1Q9UHC9 1359 aa9.39□□□□□ -0.91
KLHL3-209ENST00000508657 F8W810 466 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 H7C1W4 665 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TIPRLO75663 272 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 KRT7P08729 469 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 EPHA7Q15375 998 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 PGS1Q32NB8 556 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ADGRF2Q8IZF7 708 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 BTBD9Q96Q07 612 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SERPINI1Q99574 410 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TLE6Q9H808 572 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 NDE1Q9NXR1 346 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SNX6Q9UNH7 406 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 PTCH1Q13635 1447 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RNF103-CHMP3A0A140T963 221 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 NT5C1B-RDH14C9J2C7 533 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 GOLGA8KD6RF30 607 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 NCK2O43639 380 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 KRT14P02533 472 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 GCKP35557 465 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ARSEP51690 589 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 PMS1P54277 932 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 XRCC4Q13426 336 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 MFSD10Q14728 455 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 FSCN1Q16658 493 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RASIP1Q5U651 963 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 EDEM1Q92611 657 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 INPP5DQ92835 1189 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SGF29Q96ES7 293 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SERAC1Q96JX3 654 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 UTP6Q9NYH9 597 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TMEM88BA6NKF7 163 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ABCB1P08183 1280 aaPredicted RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RGS4P49798 205 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 IFT88Q13099 833 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 NFRKBQ6P4R8 1299 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 DIS3LQ8TF46 1054 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ELMO3Q96BJ8 720 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 GTPBP2Q9BX10 602 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 UNKQ9C0B0 810 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 HAUS4Q9H6D7 363 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 NRBP1Q9UHY1 535 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TECPR2O15040 1411 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SEC31AO94979 1220 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 OR10G6Q8NH81 332 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 OXCT2Q9BYC2 517 aaPredicted RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ATP7BP35670 1465 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RASA4BC9J798 803 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RASA4O43374 803 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 SLFN14P0C7P3 912 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 GTF2H1P32780 548 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ADCYAP1R1P41586 468 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 CXCL9Q07325 125 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 FUT11Q495W5 492 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 RABGAP1LQ5R372 815 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 FAM162AQ96A26 154 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 FMO2Q99518 471 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 BRD9Q9H8M2 597 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ZFATQ9P243 1243 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TRPC4Q9UBN4 977 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ZNHIT2Q9UHR6 403 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 LNPEPQ9UIQ6 1025 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ERN1O75460 977 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 CPSF4O95639 269 aaKnown RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 BEND6Q5SZJ8 279 aaPredicted RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 C11orf57Q6ZUT1 292 aaPredicted RBP9.38□□□□□ -0.91
KLHL3-209ENST00000508657 B3GALNT2Q8NCR0 500 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 TRAPPC12Q8WVT3 735 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 PTPRHQ9HD43 1115 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 BARHL2Q9NY43 387 aa9.38□□□□□ -0.91
KLHL3-209ENST00000508657 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
KLHL3-209ENST00000508657 CFIP05156 583 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 ARID5BQ14865 1188 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 CCDC142Q17RM4 750 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 ARSJQ5FYB0 599 aaPredicted RBP9.37□□□□□ -0.91
KLHL3-209ENST00000508657 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
KLHL3-209ENST00000508657 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 THAP9Q9H5L6 903 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 TASP1Q9H6P5 420 aa9.37□□□□□ -0.91
KLHL3-209ENST00000508657 PKD2L2Q9NZM6 624 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms