RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 SNTG2Q9NY99 539 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 CEP72Q9P209 647 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 PCDHA7Q9UN72 937 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 PCDHGA5Q9Y5G8 931 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 INSL5Q9Y5Q6 135 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 ANK1P16157 1881 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 PCNX2A6NKB5 2137 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 PLXND1Q9Y4D7 1925 aa10.01□□□□□ -0.81
UBE2D3-223ENST00000508249 CFAP46Q8IYW2 2715 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 CCDC163A0A0D9SF12 145 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 FRMD3A2A2Y4 597 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 HEPACAM2A8MVW5 462 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 K7ENM7 598 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 SLC16A4O15374 487 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 RPP40O75818 363 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 VNN2O95498 520 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 LIG1P18858 919 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PROZP22891 400 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 CMA1P23946 247 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 GRM5P41594 1212 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 BRCC3P46736 316 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 YARSP54577 528 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 GTF2BQ00403 316 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 POU5F1Q01860 360 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 SOX4Q06945 474 aaPredicted RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 ELAVL2Q12926 359 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 LRRC32Q14392 662 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 DHX8Q14562 1220 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 E2F4Q16254 413 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF568Q3ZCX4 644 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PLK5Q496M5 336 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 STXBP5Q5T5C0 1151 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 SH3PXD2AQ5TCZ1 1133 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 NT5DC1Q5TFE4 455 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PDXDC1Q6P996 788 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 SHC4Q6S5L8 630 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 MPZL3Q6UWV2 235 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 HAUS6Q7Z4H7 955 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 TMC8Q8IU68 726 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 TCEAL8Q8IYN2 117 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF461Q8TAF7 563 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 SHKBP1Q8TBC3 707 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 ZSCAN18Q8TBC5 510 aaPredicted RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 LEO1Q8WVC0 666 aaPredicted RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 MSANTD3Q96H12 275 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PPP1R10Q96QC0 940 aaKnown RBP10□□□□□ -0.81
UBE2D3-223ENST00000508249 TSPAN18Q96SJ8 248 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 GOLGA2P5Q9HBQ8 144 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PTPRHQ9HD43 1115 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 KBTBD4Q9NVX7 518 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PARP2Q9UGN5 583 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 ZDHHC9Q9Y397 364 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 PCDH15Q96QU1 1955 aa10□□□□□ -0.81
UBE2D3-223ENST00000508249 ADAMTS9Q9P2N4 1935 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 A0A1W2PQ27 194 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 A0A1W2PQ64 194 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 A0A1W2PQD8 194 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 C4orf47A7E2U8 309 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 SFI1A8K8P3 1242 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CDX4O14627 284 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 ZNF263O14978 683 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CHADO15335 359 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CLDN3O15551 220 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 THP07101 528 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 ATF2P15336 505 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 LIG4P49917 911 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CLCNKBP51801 687 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 MCL1Q07820 350 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 RAD51AP2Q09MP3 1159 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 MAPK8IP2Q13387 824 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 NOLC1Q14978 699 aaKnown RBP eCLIP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 PON2Q15165 354 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 TEAD2Q15562 447 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 UPP1Q16831 310 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 FOXD4L6Q3SYB3 417 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 GLRA4Q5JXX5 417 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 DGKKQ5KSL6 1271 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 SLFN12LQ6IEE8 588 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 FOXD4L3Q6VB84 417 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 TAS1R3Q7RTX0 852 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CACNA2D4Q7Z3S7 1137 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CEP57L1Q8IYX8 460 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 PDILTQ8N807 584 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 LRRC15Q8TF66 581 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 DNAJC19Q96DA6 116 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 BICD1Q96G01 975 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 ZFYVE19Q96K21 471 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 BBC3Q96PG8 261 aaPredicted RBP9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 TCHPQ9BT92 498 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 CDT1Q9H211 546 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 ZHX3Q9H4I2 956 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 VPS45Q9NRW7 570 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 SLC38A7Q9NVC3 462 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 GTSE1Q9NYZ3 720 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 KLK13Q9UKR3 277 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 TBX20Q9UMR3 447 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 USP20Q9Y2K6 914 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 PCDHB13Q9Y5F0 798 aa9.99□□□□□ -0.81
UBE2D3-223ENST00000508249 MYH11P35749 1972 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms