RNA–Protein interactions for RNA: ENST00000507302.6

SNF8-205, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 742 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-205ENST00000507302 SMOC1Q9H4F8 434 aa17.84■□□□□ 0.45
SNF8-205ENST00000507302 FBRSL1Q9HCM7 1045 aaKnown RBP17.84■□□□□ 0.45
SNF8-205ENST00000507302 SLC8A2Q9UPR5 921 aa17.84■□□□□ 0.45
SNF8-205ENST00000507302 PTPRDP23468 1912 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 PP2D1A8MPX8 630 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 LAD1O00515 517 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 XPOTO43592 962 aaKnown RBP17.83■□□□□ 0.44
SNF8-205ENST00000507302 PIGRP01833 764 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 F11P03951 625 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 CCDC192P0DO97 292 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 ODC1P11926 461 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 KCNA4P22459 653 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 U2AF2P26368 475 aaKnown RBP eCLIP17.83■□□□□ 0.448e-7■□□□□ 10.3
SNF8-205ENST00000507302 PRPHP41219 470 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 SMTNP53814 917 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 NCKAP1LP55160 1127 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 PPP2R3AQ06190 1150 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 SMARCB1Q12824 385 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 NBR1Q14596 966 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 RNF43Q68DV7 783 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 SYT13Q7L8C5 426 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 SYT2Q8N9I0 419 aaPredicted RBP17.83■□□□□ 0.44
SNF8-205ENST00000507302 RIN3Q8TB24 985 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 C2orf15Q8WU43 125 aaKnown RBP17.83■□□□□ 0.44
SNF8-205ENST00000507302 USP13Q92995 863 aaPredicted RBP17.83■□□□□ 0.44
SNF8-205ENST00000507302 C8orf76Q96K31 380 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 KCND2Q9NZV8 630 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 CCL26Q9Y258 94 aa17.83■□□□□ 0.44
SNF8-205ENST00000507302 BCLAF3A2AJT9 711 aaKnown RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 RNF40O75150 1001 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 EGFP01133 1207 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 HMGA1P17096 107 aaKnown RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 DRD1P21728 446 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 DDX6P26196 483 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■□□□□ 10
SNF8-205ENST00000507302 GUCY2FP51841 1108 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 ZNF268Q14587 947 aaPredicted RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 FBXO43Q4G163 708 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 KRT79Q5XKE5 535 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 TCEAL6Q6IPX3 200 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 PSAPL1Q6NUJ1 521 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 UNQ6494/PRO21346Q6UXR6 183 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 CD302Q8IX05 232 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 EZH1Q92800 747 aaPredicted RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 TCEAL3Q969E4 200 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 LLPHQ9BRT6 129 aaKnown RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 CCSER1Q9C0I3 900 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 SMG9Q9H0W8 520 aaKnown RBP17.82■□□□□ 0.44
SNF8-205ENST00000507302 KIF9Q9HAQ2 790 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 TCHHQ07283 1943 aa17.82■□□□□ 0.44
SNF8-205ENST00000507302 DMXL2Q8TDJ6 3036 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 C1QTNF9BB2RNN3 333 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 C1QTNF9P0C862 333 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 HAPLN1P10915 354 aaPredicted RBP17.81■□□□□ 0.44
SNF8-205ENST00000507302 SCP2P22307 547 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 SLC12A3P55017 1021 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 VEPH1Q14D04 833 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 KARSQ15046 597 aaKnown RBP17.81■□□□□ 0.44
SNF8-205ENST00000507302 C9orf57Q5W0N0 161 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 LRRTM3Q86VH5 581 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 EBF3Q9H4W6 596 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 POLR3BQ9NW08 1133 aaPredicted RBP17.81■□□□□ 0.44
SNF8-205ENST00000507302 CPSF3Q9UKF6 684 aaKnown RBP17.81■□□□□ 0.44
SNF8-205ENST00000507302 ZMIZ1Q9ULJ6 1067 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 DERAQ9Y315 318 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 PCDHB6Q9Y5E3 794 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 ABCA7Q8IZY2 2146 aa17.81■□□□□ 0.44
SNF8-205ENST00000507302 ANAPC1Q9H1A4 1944 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 TNRC6BQ9UPQ9 1833 aaKnown RBP17.8■□□□□ 0.44
SNF8-205ENST00000507302 A0A0B4J269 797 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 LNP1A1A4G5 178 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 H0YCG3 227 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 OGTO15294 1046 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 RHOBTB1O94844 696 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 GALK1P51570 392 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 NLRP12P59046 1061 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 AMPD2Q01433 879 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 SLC39A12Q504Y0 691 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 TRIM68Q6AZZ1 485 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 SPPL2BQ8TCT7 592 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 PNMA5Q96PV4 448 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 EDEM2Q9BV94 578 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 TDP1Q9NUW8 608 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 DSEQ9UL01 958 aa17.8■□□□□ 0.44
SNF8-205ENST00000507302 NOL7Q9UMY1 257 aaKnown RBP17.8■□□□□ 0.44
SNF8-205ENST00000507302 DSPP15924 2871 aaKnown RBP17.8■□□□□ 0.44
SNF8-205ENST00000507302 TMEM8BA6NDV4 472 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 GIPC1O14908 333 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 CAVIN2O95810 425 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 CSRP1P21291 193 aaKnown RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 GJA4P35212 333 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 NOVA1P51513 510 aaKnown RBP17.79■□□□□ 0.44
SNF8-205ENST00000507302 NEK4P51957 841 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 PDGFRLQ15198 375 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 ELF2Q15723 593 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 ARSHQ5FYA8 562 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 JADE1Q6IE81 842 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 MON1AQ86VX9 555 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 GATA6Q92908 595 aa17.79■□□□□ 0.44
SNF8-205ENST00000507302 GCNAQ96QF7 691 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms