RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 PDZD4Q76G19 769 aaPredicted RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 TMC8Q8IU68 726 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 BEST2Q8NFU1 509 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 SHKBP1Q8TBC3 707 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 SMARCD2Q92925 531 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 TBC1D32Q96NH3 1257 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 ACAP3Q96P50 834 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 TRMT61BQ9BVS5 477 aaKnown RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 GZF1Q9H116 711 aaPredicted RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 DNAJC25Q9H1X3 360 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 LMAN1LQ9HAT1 526 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 TRPV4Q9HBA0 871 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 TRPV5Q9NQA5 729 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 TOPORSQ9NS56 1045 aaPredicted RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 SLC38A7Q9NVC3 462 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 AFF4Q9UHB7 1163 aaKnown RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 MRPS17Q9Y2R5 130 aaKnown RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 HELZP42694 1942 aaKnown RBP9.28□□□□□ -0.92
CDH6-202ENST00000504835 CHD8Q9HCK8 2581 aa9.28□□□□□ -0.92
CDH6-202ENST00000504835 NUP205Q92621 2012 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 H7C4K7 107 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 MAN2B1O00754 1011 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 ZNF197O14709 1029 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 SLC16A4O15374 487 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 KRT37O76014 449 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 OR4Q2P0C623 313 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 MYL4P12829 197 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 PSMC3P17980 439 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 RPL9P32969 192 aaKnown RBP9.27□□□□□ -0.93
CDH6-202ENST00000504835 MCM4P33991 863 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 SATB1Q01826 763 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 SPAG1Q07617 926 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 APBB1IPQ7Z5R6 666 aaPredicted RBP9.27□□□□□ -0.93
CDH6-202ENST00000504835 FBXO18Q8NFZ0 1043 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 ZSCAN18Q8TBC5 510 aaPredicted RBP9.27□□□□□ -0.93
CDH6-202ENST00000504835 FAM3CQ92520 227 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 LRRC3BQ96PB8 259 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 MKNK1Q9BUB5 465 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 FAM126AQ9BYI3 521 aaPredicted RBP9.27□□□□□ -0.93
CDH6-202ENST00000504835 KMT5AQ9NQR1 393 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 C2orf42Q9NWW7 574 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 YIPF1Q9Y548 306 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 NUB1Q9Y5A7 615 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 PCDHB6Q9Y5E3 794 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 PIAS3Q9Y6X2 628 aa9.27□□□□□ -0.93
CDH6-202ENST00000504835 CNOT1A5YKK6 2376 aaKnown RBP9.27□□□□□ -0.93
CDH6-202ENST00000504835 USP24Q9UPU5 2620 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 DCDC2BA2VCK2 349 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 HEPACAM2A8MVW5 462 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 M0QZQ0 153 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 CCNE1P24864 410 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 SOX9P48436 509 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 TRAPPC10P48553 1259 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 GUCY2FP51841 1108 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 LMNB2Q03252 620 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 SPEM2Q0P670 501 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 CBLBQ13191 982 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 SRSF5Q13243 272 aaKnown RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 DMP1Q13316 513 aaPredicted RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 PDIA5Q14554 519 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 ZBTB6Q15916 424 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 STXBP5Q5T5C0 1151 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 CYP4A22Q5TCH4 519 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 ZNF280DQ6N043 979 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 MFSD6LQ8IWD5 586 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 TMEM161BQ8NDZ6 487 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 DEPDC1BQ8WUY9 529 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 ZNF512Q96ME7 567 aaPredicted RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 PGLYRP2Q96PD5 576 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 PNMA5Q96PV4 448 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 NTPCRQ9BSD7 190 aaKnown RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 RBM12Q9NTZ6 932 aaKnown RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 USP18Q9UMW8 372 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 TIMM13Q9Y5L4 95 aaPredicted RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.26□□□□□ -0.93
CDH6-202ENST00000504835 FRYQ5TBA9 3013 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 PTPRDP23468 1912 aa9.26□□□□□ -0.93
CDH6-202ENST00000504835 PRR5-ARHGAP8B1AHC4 643 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 K7ESF4 209 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 PPEF2O14830 753 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 ADAM23O75077 832 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 OAZ2O95190 189 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 CXCL8P10145 99 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 MAPTP10636 758 aaKnown RBP9.25□□□□□ -0.93
CDH6-202ENST00000504835 U2AF2P26368 475 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH6-202ENST00000504835 LRPAP1P30533 357 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 TNFSF9P41273 254 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 AARSP49588 968 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH6-202ENST00000504835 ARHGAP8P85298 464 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 DHX9Q08211 1270 aaKnown RBP9.25□□□□□ -0.93
CDH6-202ENST00000504835 NOLC1Q14978 699 aaKnown RBP eCLIP9.25□□□□□ -0.93
CDH6-202ENST00000504835 TXNDC11Q6PKC3 985 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 Q6ZS52 159 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 TTC9BQ8N6N2 239 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 APPL2Q8NEU8 664 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 LLPHQ9BRT6 129 aaKnown RBP9.25□□□□□ -0.93
CDH6-202ENST00000504835 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
CDH6-202ENST00000504835 IER2Q9BTL4 223 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms