RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 TYMPP19971 482 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 MUTP22033 750 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 U2AF2P26368 475 aaKnown RBP eCLIP17.19■□□□□ 0.347e-7■■■□□ 15.8
PDLIM7-210ENST00000503827 GJA4P35212 333 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 MAPK8P45983 427 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 NPTX2P47972 431 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 AARSP49588 968 aaKnown RBP eCLIP17.19■□□□□ 0.344e-9■■□□□ 11.9
PDLIM7-210ENST00000503827 PDGFRLQ15198 375 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 MGAT5BQ3V5L5 792 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 C19orf48Q6RUI8 117 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 CPA6Q8N4T0 437 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 USP13Q92995 863 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 CD101Q93033 1021 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 BHMT2Q9H2M3 363 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 CCL26Q9Y258 94 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 GPSM3Q9Y4H4 160 aa17.19■□□□□ 0.34
PDLIM7-210ENST00000503827 GCN1Q92616 2671 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 ADAMTS9Q9P2N4 1935 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 FAM221BA6H8Z2 402 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 ABLIM1O14639 778 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 DTNBO60941 627 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 REC8O95072 547 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 SEC24BO95487 1268 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 BCKDHBP21953 392 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 DDX6P26196 483 aaKnown RBP eCLIP17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 IRX6P78412 446 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 DMP1Q13316 513 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 SEZ6Q53EL9 994 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 HAUS3Q68CZ6 603 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 SKAP1Q86WV1 359 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 MAB21L3Q8N8X9 362 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 PLEKHA5Q9HAU0 1116 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 ARHGAP28Q9P2N2 729 aa17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 RBM19Q9Y4C8 960 aaKnown RBP17.18■□□□□ 0.34
PDLIM7-210ENST00000503827 TSC2P49815 1807 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 MYH11P35749 1972 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ENGP17813 658 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ATF6P18850 670 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 MCM7P33993 719 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 SPAG1Q07617 926 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 NOLC1Q14978 699 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 NAIF1Q69YI7 327 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ANO7Q6IWH7 933 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 TAS1R3Q7RTX0 852 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 PIP4P1Q86T03 277 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 RASSF3Q86WH2 238 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 CHCHD4Q8N4Q1 142 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 EZH1Q92800 747 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ZBTB45Q96K62 511 aaPredicted RBP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 CNOT6LQ96LI5 555 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 TM6SF1Q9BZW5 370 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ECT2Q9H8V3 914 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 PDRG1Q9NUG6 133 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 UBQLN1Q9UMX0 589 aaKnown RBP17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 ITPR1Q14643 2758 aa17.17■□□□□ 0.34
PDLIM7-210ENST00000503827 TCHHQ07283 1943 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 CEP192Q8TEP8 1941 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 UPK3BL1B0FP48 263 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 UPK3BL2E5RIL1 263 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 XPOTO43592 962 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 TOM1L1O75674 476 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 CAPNS1P04632 268 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 CXCL8P10145 99 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 ODC1P11926 461 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 CYP3A5P20815 502 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 SEMA3BQ13214 749 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 SLC39A12Q504Y0 691 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 LPCAT2Q7L5N7 544 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 HDDC3Q8N4P3 179 aa17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 SETXQ7Z333 2677 aaKnown RBP17.16■□□□□ 0.34
PDLIM7-210ENST00000503827 EIF4E1BA6NMX2 242 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 TNFRSF10BO14763 440 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 MAP3K13O43283 966 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 CCT6AP40227 531 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 DPP6P42658 865 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 ATXN3P54252 364 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 NLRP12P59046 1061 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 STRN3Q13033 797 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 ZBTB6Q15916 424 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 ZNF423Q2M1K9 1284 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 COL28A1Q2UY09 1125 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 SYT12Q8IV01 421 aa17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 DIS3L2Q8IYB7 885 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 MRPS31Q92665 395 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 DUS2Q9NX74 493 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-210ENST00000503827 PLXND1Q9Y4D7 1925 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 CLDN3O15551 220 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 PFKFB2O60825 505 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 HIP1RO75146 1068 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 ALDH1A2O94788 518 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 CTDNEP1O95476 244 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 F11P03951 625 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 PAX3P23760 479 aa17.14■□□□□ 0.33
PDLIM7-210ENST00000503827 NMT1P30419 496 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms