RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 DAAM2Q86T65 1068 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 COL23A1Q86Y22 540 aaPredicted RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 ADGRG3Q86Y34 549 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 SLC35G2Q8TBE7 412 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 MYCBPAPQ8TBZ2 947 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 ZNF384Q8TF68 577 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 NT5C1BQ96P26 610 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 PUS7Q96PZ0 661 aaKnown RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 TINAGL1Q9GZM7 467 aaPredicted RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 PRDM13Q9H4Q3 707 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 ALG13Q9NP73 1137 aaKnown RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 NMRK2Q9NPI5 230 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 DKK3Q9UBP4 350 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 TCEAL9Q9UHQ7 104 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 G3BP2Q9UN86 482 aaKnown RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 STXBP5LQ9Y2K9 1186 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 THRAP3Q9Y2W1 955 aaKnown RBP3.16□□□□□ -1.9
SMAD1-203ENST00000502342 SPATA31A3Q5VYP0 1347 aa3.16□□□□□ -1.9
SMAD1-203ENST00000502342 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PPM1DO15297 605 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PRPF3O43395 683 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 CTNND1O60716 968 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 IGLV2-14P01704 120 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 RHOP08100 348 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 NR2F6P10588 404 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 HTR1BP28222 390 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 CD6P30203 668 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 GCLCP48506 637 aaPredicted RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 SOX8P57073 446 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 SP2Q02086 613 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 ITIH3Q06033 890 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 EIF2B5Q13144 721 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 GTF2H3Q13889 308 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 LLGL1Q15334 1064 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PLEKHG6Q3KR16 790 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 RBM20Q5T481 1227 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 TSTD2Q5T7W7 516 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 VPS53Q5VIR6 699 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 TMEM108Q6UXF1 575 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 RD3Q7Z3Z2 195 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 TMPRSS9Q7Z410 1059 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PEG10Q86TG7 708 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 DENND1CQ8IV53 801 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 CHPFQ8IZ52 775 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 BOLLQ8N9W6 283 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 DIS3LQ8TF46 1054 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PDLIM2Q96JY6 352 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 SLC46A1Q96NT5 459 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 P2RX7Q99572 595 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 ACO2Q99798 780 aaKnown RBP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 ACTRT3Q9BYD9 372 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 KLK15Q9H2R5 256 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 SLC12A5Q9H2X9 1139 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 R3HDMLQ9H3Y0 253 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 CPNE5Q9HCH3 593 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 ANLNQ9NQW6 1124 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 PTGFRNQ9P2B2 879 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 SLC17A6Q9P2U8 582 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 TMX2Q9Y320 296 aa3.15□□□□□ -1.91
SMAD1-203ENST00000502342 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.15□□□□□ -1.91
SMAD1-203ENST00000502342 CCDC151A5D8V7 595 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 LRRC3CA6NJW4 275 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 MYO1CO00159 1063 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 MARCH6O60337 910 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 RFPL1O75677 317 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 DNAJB5O75953 348 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 UBXN7O94888 489 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 UNC5CO95185 931 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 GRPP07492 148 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 U2AF1L5P0DN76 240 aaPredicted RBP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 KITP10721 976 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 GRIA3P42263 894 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 IL12RB1P42701 662 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 ZNF134P52741 427 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 MAPK10P53779 464 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 CACNA2D1P54289 1103 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 ELLP55199 621 aaPredicted RBP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 U2AF1Q01081 240 aaKnown RBP eCLIP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 IQCB1Q15051 598 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 PPP2R5AQ15172 486 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 PTPRRQ15256 657 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 TBCCQ15814 346 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 NBPF8Q3BBV2 869 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 FAM153CQ494X1 144 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 LONRF3Q496Y0 759 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 EPM2AIP1Q7L775 607 aaPredicted RBP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 GRASPQ7Z6J2 395 aaPredicted RBP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 ZNF575Q86XF7 245 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 RASAL3Q86YV0 1011 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 ANKRD13AQ8IZ07 590 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 ZBTB34Q8NCN2 500 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 NELL1Q92832 810 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 FAM136AQ96C01 138 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 AIFM3Q96NN9 605 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 MOGAT1Q96PD6 335 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 BBC3Q96PG8 261 aaPredicted RBP3.14□□□□□ -1.91
SMAD1-203ENST00000502342 CAMKK2Q96RR4 588 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 HAPLN3Q96S86 360 aa3.14□□□□□ -1.91
SMAD1-203ENST00000502342 NELL2Q99435 816 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms