RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 MPP3Q13368 585 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 SF3B3Q15393 1217 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 AMOTQ4VCS5 1084 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MAEAQ7L5Y9 396 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 PPP1R32Q7Z5V6 425 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 C14orf80Q86SX3 495 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 WDR75Q8IWA0 830 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 KIAA0319LQ8IZA0 1049 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 CELF5Q8N6W0 485 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 PCSK9Q8NBP7 692 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 PSD4Q8NDX1 1056 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 FAM46DQ8NEK8 389 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 TTC8Q8TAM2 541 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 SSH3Q8TE77 659 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MRGPRX1Q96LB2 322 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 NT5C1BQ96P26 610 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 CRAMP1Q96RY5 1269 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 HEPHQ9BQS7 1158 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 AIFM2Q9BRQ8 373 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MRPS18AQ9NVS2 196 aaKnown RBP3.61□□□□□ -1.83
RIF1-212ENST00000498041 KCTD5Q9NXV2 234 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 MED16Q9Y2X0 877 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 PLEKHM1Q9Y4G2 1056 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 DMRT1Q9Y5R6 373 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 RAD54BQ9Y620 910 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.61□□□□□ -1.83
RIF1-212ENST00000498041 CC2D2AQ9P2K1 1620 aa3.61□□□□□ -1.83
RIF1-212ENST00000498041 ATAD2BQ9ULI0 1458 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 A0A0B4J269 797 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 VSTM5A8MXK1 200 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 F5H697 171 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 PHGDHO43175 533 aaKnown RBP3.6□□□□□ -1.83
RIF1-212ENST00000498041 TRIAP1O43715 76 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 PEX1O43933 1283 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 DNAJB5O75953 348 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 UNC5CO95185 931 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 PIM1P11309 404 aaPredicted RBP3.6□□□□□ -1.83
RIF1-212ENST00000498041 ATF3P18847 181 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 ITGALP20701 1170 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 LMO1P25800 156 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 MPLP40238 635 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 NPTX2P47972 431 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 NDUFV1P49821 464 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 FOXI1Q12951 378 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 TUBB3Q13509 450 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 GBX1Q14549 363 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 TAF2Q6P1X5 1199 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 VWA1Q6PCB0 445 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 PCSK4Q6UW60 755 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 Q6ZNX1 250 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 SRGAP1Q7Z6B7 1085 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 SLC44A3Q8N4M1 653 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 SLC30A5Q8TAD4 765 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 KBTBD7Q8WVZ9 684 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 SLC9A6Q92581 669 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 ZMAT3Q9HA38 289 aaKnown RBP3.6□□□□□ -1.83
RIF1-212ENST00000498041 PRDM11Q9NQV5 511 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 OBP2AQ9NY56 170 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 L1RE1Q9UN81 338 aa3.6□□□□□ -1.83
RIF1-212ENST00000498041 BAZ1AQ9NRL2 1556 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 YY2O15391 372 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 PROM1O43490 865 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 PARNO95453 639 aaKnown RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 GRPP07492 148 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 KITP10721 976 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 NPR1P16066 1061 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CHRM3P20309 590 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 PROZP22891 400 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 FOLR3P41439 243 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 GCLCP48506 637 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 TOB1P50616 345 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 ARFIP2P53365 341 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CACNB3P54284 484 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 GRM3Q14832 879 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 LLGL1Q15334 1064 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CNN3Q15417 329 aaKnown RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 LONRF3Q496Y0 759 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CHST15Q7LFX5 561 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 B3GALNT2Q8NCR0 500 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 OR6B3Q8NGW1 331 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 IL31RAQ8NI17 732 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 FBXO41Q8TF61 875 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 LPIN2Q92539 896 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 SLC46A1Q96NT5 459 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 MOGAT1Q96PD6 335 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 OSBPL9Q96SU4 736 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 AGAP2Q99490 1192 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 P2RX7Q99572 595 aaKnown RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 SPATA5L1Q9BVQ7 753 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 TRIM54Q9BYV2 358 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 SMOC2Q9H3U7 446 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 ATP6V0A4Q9HBG4 840 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 CHPF2Q9P2E5 772 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 HESX1Q9UBX0 185 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 DDX20Q9UHI6 824 aaKnown RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.59□□□□□ -1.83
RIF1-212ENST00000498041 TMX2Q9Y320 296 aa3.59□□□□□ -1.83
RIF1-212ENST00000498041 FRMPD2Q68DX3 1309 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms