RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 K7ENM7 598 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 PXNP49023 591 aaPredicted RBP23.53■■□□□ 1.36
CLIC4-204ENST00000497755 MCM2P49736 904 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 DHX8Q14562 1220 aaKnown RBP23.53■■□□□ 1.36
CLIC4-204ENST00000497755 TMEM132DQ14C87 1099 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 TMEM150AQ86TG1 271 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 GPBP1Q86WP2 473 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 CMTM8Q8IZV2 173 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 CHFRQ96EP1 664 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 FIZ1Q96SL8 496 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 ARRDC1-AS1Q9H2J1 176 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 PARVGQ9HBI0 331 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 DSEQ9UL01 958 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 DENND4CQ5VZ89 1909 aa23.53■■□□□ 1.36
CLIC4-204ENST00000497755 ANKRD63C9JTQ0 380 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 CYB561D2O14569 222 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 TRAK2O60296 914 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 FAM13AO94988 1023 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 NEFLP07196 543 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 HAPLN1P10915 354 aaPredicted RBP23.52■■□□□ 1.36
CLIC4-204ENST00000497755 ACOT2P49753 483 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 PTPAQ15257 358 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 SF3A2Q15428 464 aaKnown RBP23.52■■□□□ 1.36
CLIC4-204ENST00000497755 ST3GAL2Q16842 350 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 TMEM196Q5HYL7 178 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 FSTL4Q6MZW2 842 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 GAB3Q8WWW8 586 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 GCNAQ96QF7 691 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 ASB7Q9H672 318 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 HPS4Q9NQG7 708 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 BLOC1S4Q9NUP1 217 aa23.52■■□□□ 1.36
CLIC4-204ENST00000497755 ZNF638Q14966 1978 aaKnown RBP23.51■■□□□ 1.35
CLIC4-204ENST00000497755 CCDC163A0A0D9SF12 145 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 TM4SF5O14894 197 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 SLC26A4O43511 780 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 RAP1GAPP47736 663 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 GTF2BQ00403 316 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 SMARCB1Q12824 385 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 RUNX3Q13761 415 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 CCDC6Q16204 474 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 TAF12Q16514 161 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 WSCD1Q658N2 575 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 CACNA2D4Q7Z3S7 1137 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 METTL23Q86XA0 190 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 THEM5Q8N1Q8 247 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 C2orf15Q8WU43 125 aaKnown RBP23.51■■□□□ 1.35
CLIC4-204ENST00000497755 DDX1Q92499 740 aaKnown RBP23.51■■□□□ 1.35
CLIC4-204ENST00000497755 LOXL4Q96JB6 756 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 AK8Q96MA6 479 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 PYM1Q9BRP8 204 aaKnown RBP23.51■■□□□ 1.35
CLIC4-204ENST00000497755 RXFP3Q9NSD7 469 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 CCL26Q9Y258 94 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 LAMA1P25391 3075 aa23.51■■□□□ 1.35
CLIC4-204ENST00000497755 TISP43B9A030 160 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 TRDMT1O14717 391 aaKnown RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 RPP40O75818 363 aaKnown RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 F11P03951 625 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 ZNF806P0C7X5 589 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 HMGA1P17096 107 aaKnown RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 NMT1P30419 496 aaKnown RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 LIMK1P53667 647 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 TRIM68Q6AZZ1 485 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 KBTBD6Q86V97 674 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 MAB21L3Q8N8X9 362 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 SPPL2BQ8TCT7 592 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 USP13Q92995 863 aaPredicted RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 EBF3Q9H4W6 596 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 FBRSL1Q9HCM7 1045 aaKnown RBP23.5■■□□□ 1.35
CLIC4-204ENST00000497755 DPP3Q9NY33 737 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 ZMYM5Q9UJ78 669 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 C2CD2Q9Y426 696 aa23.5■■□□□ 1.35
CLIC4-204ENST00000497755 UBA7P41226 1012 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 TAF6P49848 677 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 NLRP12P59046 1061 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 GRSF1Q12849 480 aaKnown RBP eCLIP23.49■■□□□ 1.35
CLIC4-204ENST00000497755 MCM6Q14566 821 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 AASDHQ4L235 1098 aaPredicted RBP23.49■■□□□ 1.35
CLIC4-204ENST00000497755 ZC2HC1CQ53FD0 456 aaPredicted RBP23.49■■□□□ 1.35
CLIC4-204ENST00000497755 ADALQ6DHV7 355 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 IL31Q6EBC2 164 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 CALML4Q96GE6 196 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 CHAMP1Q96JM3 812 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 CCSER1Q9C0I3 900 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 ZHX3Q9H4I2 956 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 POLR3BQ9NW08 1133 aaPredicted RBP23.49■■□□□ 1.35
CLIC4-204ENST00000497755 ABI2Q9NYB9 513 aaPredicted RBP23.49■■□□□ 1.35
CLIC4-204ENST00000497755 KIF3AQ9Y496 699 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 STYXL1Q9Y6J8 313 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 CHD6Q8TD26 2715 aa23.49■■□□□ 1.35
CLIC4-204ENST00000497755 ATG13O75143 517 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 EPN2O95208 641 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 AVPR1AP37288 418 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 RIN3Q8TB24 985 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 TDP1Q9NUW8 608 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 TMLHEQ9NVH6 421 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 SLC8A2Q9UPR5 921 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 TCHHQ07283 1943 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 EML5Q05BV3 1969 aa23.48■■□□□ 1.35
CLIC4-204ENST00000497755 EGFP01133 1207 aa23.47■■□□□ 1.35
CLIC4-204ENST00000497755 KCNA4P22459 653 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms