RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 RSAD2Q8WXG1 361 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 ASIC4Q96FT7 647 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 XYLT2Q9H1B5 865 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 TMLHEQ9NVH6 421 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 IGSF9Q9P2J2 1179 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 HSFX1Q9UBD0 423 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 CDH7Q9ULB5 785 aa17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 ZFP37Q9Y6Q3 630 aaPredicted RBP17.14■□□□□ 0.33
CTDSP1-214ENST00000497677 TECTAO75443 2155 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 C2orf16Q68DN1 1984 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 MAPK13O15264 365 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 AKAP3O75969 853 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 CCR2P41597 374 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 PRCPP42785 496 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 CDR1P51861 262 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 EPHA5P54756 1037 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 SIGLEC14Q08ET2 396 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 SLC39A12Q504Y0 691 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 COBLL1Q53SF7 1204 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 ZNF658Q5TYW1 1059 aaPredicted RBP17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 TDRD10Q5VZ19 366 aaKnown RBP17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 NPAS3Q8IXF0 933 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 UBALD2Q8IYN6 164 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 HS6ST3Q8IZP7 471 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 TMC2Q8TDI7 906 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 KBTBD7Q8WVZ9 684 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 ACBD6Q9BR61 282 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 CORO1BQ9BR76 489 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 LRRC3Q9BY71 257 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 DENND4AQ7Z401 1863 aa17.13■□□□□ 0.33
CTDSP1-214ENST00000497677 TMEM221A6NGB7 291 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 SMTNL1A8MU46 457 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 M0R296 226 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 HCRTO43612 131 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 MOSPD3O75425 235 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 SOAT2O75908 522 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 STAU1O95793 577 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 NR2F2P24468 414 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 AP3M2P53677 418 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 MYL6P60660 151 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 TPM4P67936 248 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 SMARCB1Q12824 385 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 TDGQ13569 410 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 MTMR3Q13615 1198 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 HTR4Q13639 388 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 HFE2Q6ZVN8 426 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 BMP8AQ7Z5Y6 402 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 ADGRF2Q8IZF7 708 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 SLC44A3Q8N4M1 653 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 RNF214Q8ND24 703 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 ST13P5Q8NFI4 369 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 NXPE3Q969Y0 559 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 TCEAL4Q96EI5 215 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 ZNF512Q96ME7 567 aaPredicted RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 RPP25Q9BUL9 199 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 MRPS23Q9Y3D9 190 aaKnown RBP17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 DOCK6Q96HP0 2047 aa17.12■□□□□ 0.33
CTDSP1-214ENST00000497677 BECN2A8MW95 431 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 MICAL2O94851 1124 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 VNN1O95497 513 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 FAM163BP0C2L3 166 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 ACAT1P24752 427 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 LMO2P25791 158 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 LHX1P48742 406 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 ADAM9Q13443 819 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 MORC3Q14149 939 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 EDRF1Q3B7T1 1238 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 INTS6LQ5JSJ4 861 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 PARM1Q6UWI2 310 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 C2orf15Q8WU43 125 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 VRTNQ9H8Y1 702 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 CBX8Q9HC52 389 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 MAN1B1Q9UKM7 699 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 FRMD4BQ9Y2L6 1034 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 R3HCC1Q9Y3T6 440 aaKnown RBP17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 NME7Q9Y5B8 376 aa17.11■□□□□ 0.33
CTDSP1-214ENST00000497677 NOTCH4Q99466 2003 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 IKBKBO14920 756 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 HAPLN1P10915 354 aaPredicted RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 CEBPBP17676 345 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ATF6P18850 670 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 BMP6P22004 513 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 RPL13P26373 211 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ATICP31939 592 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 PPP1R2P41236 205 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ALDH1A3P47895 512 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 TUFMP49411 452 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 PMS1P54277 932 aaKnown RBP17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 CCDC173Q0VFZ6 552 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 PLD1Q13393 1074 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 CCDC142Q17RM4 750 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 ZACNQ401N2 412 aa17.1■□□□□ 0.33
CTDSP1-214ENST00000497677 IQCEQ6IPM2 695 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms