RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SLC8A2Q9UPR5 921 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 SMC3Q9UQE7 1217 aa10.41□□□□□ -0.74
UBR4-216ENST00000494503 A0A0B4J269 797 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 TISP43B9A030 160 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 GDF9O60383 454 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 ATF6P18850 670 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 CNR2P34972 360 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 TSPY1Q01534 308 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 GRSF1Q12849 480 aaKnown RBP eCLIP10.4□□□□□ -0.74
UBR4-216ENST00000494503 PSMD2Q13200 908 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 RABEP1Q15276 862 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 WSCD1Q658N2 575 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 TRIM68Q6AZZ1 485 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 DYMQ7RTS9 669 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 DCP1BQ8IZD4 617 aaKnown RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 KCTD17Q8N5Z5 321 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 FAM160A2Q8N612 972 aaPredicted RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 RAD54LQ92698 747 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 ZNF560Q96MR9 790 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 LRRC3BQ96PB8 259 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 PI4K2AQ9BTU6 479 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 ZCWPW1Q9H0M4 648 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 EBF3Q9H4W6 596 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 GKN1Q9NS71 199 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 C2orf42Q9NWW7 574 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 TBC1D7Q9P0N9 293 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 CPSF3Q9UKF6 684 aaKnown RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 AGO2Q9UKV8 859 aaKnown RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 R3HCC1Q9Y3T6 440 aaKnown RBP10.4□□□□□ -0.74
UBR4-216ENST00000494503 DENND4CQ5VZ89 1909 aa10.4□□□□□ -0.74
UBR4-216ENST00000494503 GREB1Q4ZG55 1949 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 OBSL1O75147 1896 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 VPS37CA5D8V6 355 aaPredicted RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 ANKRD63C9JTQ0 380 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 K7ESF4 209 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SLC30A4O14863 429 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 EXTL3O43909 919 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 LRP3O75074 770 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 RPP40O75818 363 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 KRT37O76014 449 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 KRT19P08727 400 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SCP2P22307 547 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 TGM1P22735 817 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 HOXC13P31276 330 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 ABCD1P33897 745 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 MLLT6P55198 1093 aaPredicted RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 TFAMQ00059 246 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 CSRP2Q16527 193 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SV2CQ496J9 727 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SDHAF4Q5VUM1 108 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 LARP1BQ659C4 914 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 SLFN12LQ6IEE8 588 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SLC39A4Q6P5W5 647 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 CMTM8Q8IZV2 173 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 SPPL2BQ8TCT7 592 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 LARP4BQ92615 738 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 MRPS31Q92665 395 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 TMX3Q96JJ7 454 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 TSPAN18Q96SJ8 248 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 KIF2CQ99661 725 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 MKNK1Q9BUB5 465 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 MRPL44Q9H9J2 332 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 UPF2Q9HAU5 1272 aaKnown RBP10.39□□□□□ -0.75
UBR4-216ENST00000494503 OBP2AQ9NY56 170 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 DERAQ9Y315 318 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 PCDHB5Q9Y5E4 795 aa10.39□□□□□ -0.75
UBR4-216ENST00000494503 KPNA7A9QM74 516 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 PIRO00625 290 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 FAM189A1O60320 539 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 ATG13O75143 517 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 CLSTN1O94985 981 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 BMP15O95972 392 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 PIGRP01833 764 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 HAPLN1P10915 354 aaPredicted RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 PAX3P23760 479 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 ACAT1P24752 427 aaKnown RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 POLR2BP30876 1174 aaKnown RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 GPR15P49685 360 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 AMPD2Q01433 879 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 GRIN1Q05586 938 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 RUNX3Q13761 415 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 CCINQ13939 588 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SF3A2Q15428 464 aaKnown RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 TXNDC8Q6A555 127 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SFR1Q86XK3 245 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SCN4BQ8IWT1 228 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SYCP3Q8IZU3 236 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 C2orf15Q8WU43 125 aaKnown RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 SAAL1Q96ER3 474 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 HHIPQ96QV1 700 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 FAM213AQ9BRX8 229 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 SLC46A2Q9BY10 475 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 IKZF4Q9H2S9 585 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 ASB7Q9H672 318 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 BLOC1S4Q9NUP1 217 aa10.38□□□□□ -0.75
UBR4-216ENST00000494503 CIZ1Q9ULV3 898 aaPredicted RBP10.38□□□□□ -0.75
UBR4-216ENST00000494503 CCL26Q9Y258 94 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms