RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 USH1GQ495M9 461 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 SYDE2Q5VT97 1194 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 BTNL9Q6UXG8 535 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 SLC30A10Q6XR72 485 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 SEPT14Q6ZU15 432 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 OTOP3Q7RTS5 596 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 KIF18BQ86Y91 864 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 IRF2BP1Q8IU81 584 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 HERC6Q8IVU3 1022 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 RAVER1Q8IY67 606 aaKnown RBP6□□□□□ -1.45
PTCD3-219ENST00000494323 IGSF22Q8N9C0 903 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 ATL2Q8NHH9 583 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 PHOSPHO2Q8TCD6 241 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 CLEC4DQ8WXI8 215 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 SEC14L1Q92503 715 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 PEX11GQ96HA9 241 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 LRFN3Q9BTN0 628 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 C1QTNF1Q9BXJ1 281 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 ASPSCR1Q9BZE9 553 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 RANBP17Q9H2T7 1088 aaKnown RBP6□□□□□ -1.45
PTCD3-219ENST00000494323 EPB41L4BQ9H329 900 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 CPVLQ9H3G5 476 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 SLC6A20Q9NP91 592 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 MTUS1Q9ULD2 1270 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 COQ6Q9Y2Z9 468 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 NUB1Q9Y5A7 615 aa6□□□□□ -1.45
PTCD3-219ENST00000494323 TTC41PQ6P2S7 1318 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 MYH7BA7E2Y1 1941 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 LCTP09848 1927 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 TRANK1O15050 2925 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 PLIN4Q96Q06 1357 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 LCHNA4D1U4 455 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 OR14I1A6ND48 311 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 ZNF891A8MT65 544 aaPredicted RBP5.99□□□□□ -1.45
PTCD3-219ENST00000494323 NEMP1O14524 444 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 LPXNO60711 386 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 ARIH2O95376 493 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 PFKMP08237 780 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 PYGMP11217 842 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 TOP1P11387 765 aaKnown RBP5.99□□□□□ -1.45
PTCD3-219ENST00000494323 MX1P20591 662 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 NOVP48745 357 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 HAND2P61296 217 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 DSG1Q02413 1049 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 BFSP2Q13515 415 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 PPP2R5BQ15173 497 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 GPR19Q15760 415 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 TCTN1Q2MV58 587 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 TMEM177Q53S58 311 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 EMC4Q5J8M3 183 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 ADGRF1Q5T601 910 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 ANKRD45Q5TZF3 282 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 NFRKBQ6P4R8 1299 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 SCFD2Q8WU76 684 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 AFG1LQ8WV93 481 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 TAAR1Q96RJ0 339 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 VAT1LQ9HCJ6 419 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 CD320Q9NPF0 282 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 ANAPC4Q9UJX5 808 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 COG5Q9UP83 839 aa5.99□□□□□ -1.45
PTCD3-219ENST00000494323 SCN10AQ9Y5Y9 1956 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 XIRP2A4UGR9 3374 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ABLIM1O14639 778 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 HGSO14964 777 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 NKRFO15226 690 aaKnown RBP eCLIP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ORC4O43929 436 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 KATNA1O75449 491 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 PDHBP11177 359 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 RFC2P35250 354 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ID4P47928 161 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 MECP2P51608 486 aaKnown RBP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 GUCY2FP51841 1108 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 DEFB103AP81534 67 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ZNF200P98182 395 aaPredicted RBP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ZNF543Q08ER8 600 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 MTMR1Q13613 665 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ALX1Q15699 326 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 ARHGAP44Q17R89 818 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 STEAP3Q658P3 488 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 CCDC62Q6P9F0 684 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 MFSD6Q6ZSS7 791 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 PIP4K2CQ8TBX8 421 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 GDPD5Q8WTR4 605 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 KAT2BQ92831 832 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 CTAGE1Q96RT6 745 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 MPHOSPH6Q99547 160 aaKnown RBP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 TRIM8Q9BZR9 551 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 HELLSQ9NRZ9 838 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 TCP11L1Q9NUJ3 509 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 HDAC6Q9UBN7 1215 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 DBR1Q9UK59 544 aaKnown RBP5.98□□□□□ -1.45
PTCD3-219ENST00000494323 CBLCQ9ULV8 474 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 MUC6Q6W4X9 2439 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 RAD50Q92878 1312 aa5.98□□□□□ -1.45
PTCD3-219ENST00000494323 LOC102724159A0A0B4J2E5 919 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 A0A0D9SFI3 127 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 B4DLN1 442 aa5.97□□□□□ -1.45
PTCD3-219ENST00000494323 ZNF561-AS1K7EIQ3 104 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms