RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 CEP72Q9P209 647 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 DAXXQ9UER7 740 aaPredicted RBP12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 FBXL5Q9UKA1 691 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 TNFSF13BQ9Y275 285 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
CACNA1C-228ENST00000492150 H7C4K7 107 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 PYCARD-AS1I3L0S3 204 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 LARGE1O95461 756 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 GJA1P17302 382 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 MCM7P33993 719 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 FOSBP53539 338 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 EPHA5P54756 1037 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 OSTNP61366 133 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 GRSF1Q12849 480 aaKnown RBP eCLIP12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 ECM1Q16610 540 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 CYP4A22Q5TCH4 519 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 HAUS6Q7Z4H7 955 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 RSPRY1Q96DX4 576 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 IFT74Q96LB3 600 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 ZNF512Q96ME7 567 aaPredicted RBP12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 KIF2CQ99661 725 aa12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 ACO2Q99798 780 aaKnown RBP12.78□□□□□ -0.36
CACNA1C-228ENST00000492150 ABCA12Q86UK0 2595 aa12.77□□□□□ -0.36
CACNA1C-228ENST00000492150 K7ERI5 159 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 RNF40O75150 1001 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 MYL4P12829 197 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 KCNE1P15382 129 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 BCKDHBP21953 392 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 EIF2S3P41091 472 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 CCR10P46092 362 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 YARSP54577 528 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 TWF1Q12792 350 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 PTPAQ15257 358 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 ME3Q16798 604 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 FBXO43Q4G163 708 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 CTXN3Q4LDR2 81 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 SPDYCQ5MJ68 293 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 IQCEQ6IPM2 695 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 FSTL4Q6MZW2 842 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 LRRC69Q6ZNQ3 347 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 TAS1R3Q7RTX0 852 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 APBB1IPQ7Z5R6 666 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 GALNT15Q8N3T1 639 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 NSUN7Q8NE18 718 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 KIFAP3Q92845 792 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 GTF3C6Q969F1 213 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 C18orf25Q96B23 403 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 SUSD3Q96L08 255 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 CCDC94Q9BW85 323 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 TOPORSQ9NS56 1045 aaPredicted RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 AFF4Q9UHB7 1163 aaKnown RBP12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 SLC6A14Q9UN76 642 aa12.77□□□□□ -0.37
CACNA1C-228ENST00000492150 CREBBPQ92793 2442 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 NOTCH2Q04721 2471 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ABLIM1O14639 778 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 TRDMT1O14717 391 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 JAK2O60674 1132 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 DKK1O94907 266 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 VNN2O95498 520 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 MUTP22033 750 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 RPL9P32969 192 aaKnown RBP12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 DGKEP52429 567 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 PLCB2Q00722 1185 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 TEAD2Q15562 447 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ZNF568Q3ZCX4 644 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ZNF280DQ6N043 979 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 RNF19BQ6ZMZ0 732 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 SLCO6A1Q86UG4 719 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 RASSF3Q86WH2 238 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ELMOD1Q8N336 334 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 MINDY1Q8N5J2 469 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ERMNQ8TAM6 284 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 CEP76Q8TAP6 659 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 ACDQ96AP0 544 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 LRRC3Q9BY71 257 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 BHMT2Q9H2M3 363 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 CAPN10Q9HC96 672 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 KCNK4Q9NYG8 393 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 CNTN3Q9P232 1028 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 DNMT3LQ9UJW3 386 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 PILRBQ9UKJ0 227 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 MAFFQ9ULX9 164 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 NUB1Q9Y5A7 615 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
CACNA1C-228ENST00000492150 SH3BP5O60239 455 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 GJB3O75712 270 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 GP1BBP13224 206 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 C6P13671 934 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 PROZP22891 400 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 NPTX2P47972 431 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 KNTC1P50748 2209 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 DMC1Q14565 340 aa12.75□□□□□ -0.37
CACNA1C-228ENST00000492150 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms