RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 TOM1L1O75674 476 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SERPINC1P01008 464 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 IGLV1-40P01703 118 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 TFRCP02786 760 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CTSBP07858 339 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CTSHP09668 335 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 GARTP22102 1010 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 EIF4BP23588 611 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ABCD1P33897 745 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PSMC2P35998 433 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 TNFSF9P41273 254 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ACOT2P49753 483 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 KLK7P49862 253 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 LIG4P49917 911 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CRYBB1P53674 252 aaPredicted RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 UBASH3AP57075 661 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 DLG4P78352 724 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MCL1Q07820 350 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 RBL2Q08999 1139 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 STRN3Q13033 797 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PRPF4BQ13523 1007 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 GPNMBQ14956 572 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SNRNP35Q16560 246 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SEZ6Q53EL9 994 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 UBXN11Q5T124 520 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ZNF618Q5T7W0 954 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ATF7IP2Q5U623 682 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SCARA3Q6AZY7 606 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 DPY19L2P1Q6NXN4 242 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ARMCX5Q6P1M9 558 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SLC39A5Q6ZMH5 540 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SND1Q7KZF4 910 aaKnown RBP eCLIP5.28□□□□□ -1.569e-10■■■■■ 27.9
EPCAM-206ENST00000490733 TMC7Q7Z402 723 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 FRMD5Q7Z6J6 570 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 FAM228AQ86W67 206 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 FAM186BQ8IYM0 893 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 XXYLT1Q8NBI6 393 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 POMGNT1Q8WZA1 660 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SLC35C1Q96A29 364 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ALKBH8Q96BT7 664 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 BICD1Q96G01 975 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MRFAP1L1Q96HT8 127 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 FAM84AQ96KN4 292 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 DMRTB1Q96MA1 342 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MFSD14AQ96MC6 490 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PPP1R9BQ96SB3 815 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MRPL4Q9BYD3 311 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CELF4Q9BZC1 486 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 GCOM2Q9BZD3 368 aaPredicted RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 TRIM5Q9C035 493 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MCOLN1Q9GZU1 580 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CDT1Q9H211 546 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 VPS16Q9H269 839 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 CXCL16Q9H2A7 254 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ZNF576Q9H609 170 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 AGO3Q9H9G7 860 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PRDM10Q9NQV6 1147 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PRMT7Q9NVM4 692 aaPredicted RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 TNFSF13BQ9Y275 285 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 NOC2LQ9Y3T9 749 aaKnown RBP5.28□□□□□ -1.56
EPCAM-206ENST00000490733 TRPV2Q9Y5S1 764 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 SCN1AP35498 2009 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 MICAL3Q7RTP6 2002 aa5.28□□□□□ -1.56
EPCAM-206ENST00000490733 PTPRJQ12913 1337 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 UMODL1Q5DID0 1318 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 N4BP3O15049 544 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 EPHB6O15197 1021 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 MAPK13O15264 365 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 CLDN3O15551 220 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 EXTL3O43909 919 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 EXOC3O60645 756 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 LRRN2O75325 713 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TIAF1O95411 115 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 FGFR1OPO95684 399 aaKnown RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 GNA14O95837 355 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TRIM49P0CI25 452 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TRIM49CP0CI26 452 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 EPB41P11171 864 aaKnown RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 CKBP12277 381 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 ITPKAP23677 461 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 DEKP35659 375 aaKnown RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 THPOP40225 353 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 MTIF2P46199 727 aaKnown RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 RANBP2P49792 3224 aaKnown RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TPM4P67936 248 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 CDC42EP1Q00587 391 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 APBA1Q02410 837 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 SPAG1Q07617 926 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 CYP24A1Q07973 514 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 PPP3CAQ08209 521 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 FAAP100Q0VG06 881 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 BFSP1Q12934 665 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TBX2Q13207 712 aaPredicted RBP5.27□□□□□ -1.57
EPCAM-206ENST00000490733 LPIN1Q14693 890 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 NOLC1Q14978 699 aaKnown RBP eCLIP5.27□□□□□ -1.575e-7■■■□□ 14.8
EPCAM-206ENST00000490733 MAN2A1Q16706 1144 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 TCTN1Q2MV58 587 aa5.27□□□□□ -1.57
EPCAM-206ENST00000490733 ZNF568Q3ZCX4 644 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms