RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 GPR17Q13304 367 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 AAMPQ13685 434 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 PEAR1Q5VY43 1037 aaPredicted RBP14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 Q6ZUG5 572 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 KRT25Q7Z3Z0 450 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 NEK8Q86SG6 692 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 SLCO6A1Q86UG4 719 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 ITIH5Q86UX2 942 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 MARCH9Q86YJ5 346 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 ZNF843Q8N446 348 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 CCDC33Q8N5R6 958 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 USP33Q8TEY7 942 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 KIFC3Q9BVG8 833 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 CAPN10Q9HC96 672 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 TOPORSQ9NS56 1045 aaPredicted RBP14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 PCDHB9Q9Y5E1 797 aa14.95□□□□□ -0.02
EXOSC3-207ENST00000490516 A0A087WV48 116 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 ATP2B1P20020 1258 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 CDC25CP30307 473 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 GRM5P41594 1212 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 CCT2P78371 535 aaKnown RBP14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 CYP4F3Q08477 520 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 BFSP1Q12934 665 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 DUOXA1Q1HG43 343 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 DEFB119Q8N690 84 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 MAB21L3Q8N8X9 362 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 DEPTORQ8TB45 409 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 EXOC4Q96A65 974 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 AIFM3Q96NN9 605 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 GCNAQ96QF7 691 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 ECT2Q9H8V3 914 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 DKK4Q9UBT3 224 aa14.94□□□□□ -0.02
EXOSC3-207ENST00000490516 GOLGA4Q13439 2230 aaKnown RBP14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 SERPINF2P08697 491 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 KCNE1P15382 129 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 GCFC2P16383 781 aaKnown RBP14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 NMT1P30419 496 aaKnown RBP14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 AVPR1AP37288 418 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 PDGFRLQ15198 375 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 CRY1Q16526 586 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 TMEM92Q6UXU6 159 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 TOGARAM2Q6ZUX3 1019 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 CPA6Q8N4T0 437 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 MCPH1Q8NEM0 835 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 PIP4K2CQ8TBX8 421 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 SPACA7Q96KW9 195 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 CDT1Q9H211 546 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 POLMQ9NP87 494 aaPredicted RBP14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 TDP1Q9NUW8 608 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 DNAAF2Q9NVR5 837 aaKnown RBP14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
EXOSC3-207ENST00000490516 J3QKU1 62 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 K7EQS6 105 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 M0QZQ0 153 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 ARHGAP33O14559 1287 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 LARGE1O95461 756 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 ATF6P18850 670 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 DPP6P42658 865 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 NAMPTP43490 491 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 TSGA10IPQ3SY00 556 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 TMEM150AQ86TG1 271 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 NAXDQ8IW45 347 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 SCUBE3Q8IX30 993 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 SLFN12Q8IYM2 578 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 CEP76Q8TAP6 659 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 DCBLD2Q96PD2 775 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 SEPT5Q99719 369 aaPredicted RBP14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 POLD4Q9HCU8 107 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 CNTN3Q9P232 1028 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 TUBGCP4Q9UGJ1 667 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 KCNJ14Q9UNX9 436 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 APOBEC2Q9Y235 224 aaKnown RBP14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 TSC2P49815 1807 aa14.92□□□□□ -0.02
EXOSC3-207ENST00000490516 MUC22E2RYF6 1773 aaPredicted RBP14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 OR6C75A6NL08 312 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 BAG4O95429 457 aaKnown RBP14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 HSPA4P34932 840 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 HOXD12P35452 270 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 ABCG1P45844 678 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 NBR1Q14596 966 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 MAP7D1Q3KQU3 841 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 TXNDC8Q6A555 127 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 APBB1IPQ7Z5R6 666 aaPredicted RBP14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 TTC16Q8NEE8 873 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 WHAMMQ8TF30 809 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 GIPC2Q8TF65 315 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 KIF9Q9HAQ2 790 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 DUS2Q9NX74 493 aaKnown RBP14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 TNFSF13BQ9Y275 285 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 WNT6Q9Y6F9 365 aa14.91□□□□□ -0.02
EXOSC3-207ENST00000490516 TRABD2BA6NFA1 517 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 GJB3O75712 270 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 ALDH1A2O94788 518 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 SSRP1Q08945 709 aaKnown RBP14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 SLC14A1Q13336 389 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 VEPH1Q14D04 833 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 ZNF568Q3ZCX4 644 aa14.9□□□□□ -0.02
EXOSC3-207ENST00000490516 SPDYCQ5MJ68 293 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms