RNA–Protein interactions for RNA: ENST00000490175.5

SNX5-214, Transcript of sorting nexin 5, humanhuman

TSL 1 (best)

Gene SNX5, Length 2,025 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-214ENST00000490175 WDR35Q9P2L0 1181 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 DERAQ9Y315 318 aa17.02■□□□□ 0.32
SNX5-214ENST00000490175 NRCAMQ92823 1304 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SSR1P43307 286 aaKnown RBP17.01■□□□□ 0.31
SNX5-214ENST00000490175 RAP1GAPP47736 663 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 KRT17Q04695 432 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 PTPN11Q06124 597 aaPredicted RBP17.01■□□□□ 0.31
SNX5-214ENST00000490175 PTK6Q13882 451 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 MORN1Q5T089 497 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 KCTD16Q68DU8 428 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SLC4A11Q8NBS3 891 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 TMEM176AQ96HP8 235 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 HPDLQ96IR7 371 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 GCOM2Q9BZD3 368 aaPredicted RBP17.01■□□□□ 0.31
SNX5-214ENST00000490175 SDCBP2Q9H190 292 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 CHST7Q9NS84 486 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 RSPH14Q9UHP6 348 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 GJB6O95452 261 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 F2P00734 622 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 ITIH2P19823 946 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 NR1D1P20393 614 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 PTPN7P35236 360 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 ZNF252P-AS1Q0IIN9 211 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 NFX1Q12986 1120 aaKnown RBP17.01■□□□□ 0.31
SNX5-214ENST00000490175 MAP2K5Q13163 448 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 DAB2IPQ5VWQ8 1189 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SH2D3CQ8N5H7 860 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 FNIP1Q8TF40 1166 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 ADAMTS10Q9H324 1103 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SMYD3Q9H7B4 428 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SETD4Q9NVD3 440 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 DPP3Q9NY33 737 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 DDX56Q9NY93 547 aaKnown RBP17.01■□□□□ 0.31
SNX5-214ENST00000490175 RALGAPA2Q2PPJ7 1873 aa17.01■□□□□ 0.31
SNX5-214ENST00000490175 SIGLEC16A6NMB1 481 aa17■□□□□ 0.31
SNX5-214ENST00000490175 O00370 1275 aa17■□□□□ 0.31
SNX5-214ENST00000490175 ADCY6O43306 1168 aa17■□□□□ 0.31
SNX5-214ENST00000490175 VDRP11473 427 aa17■□□□□ 0.31
SNX5-214ENST00000490175 IRAK1P51617 712 aa17■□□□□ 0.31
SNX5-214ENST00000490175 CDH8P55286 799 aa17■□□□□ 0.31
SNX5-214ENST00000490175 CAV1Q03135 178 aa17■□□□□ 0.31
SNX5-214ENST00000490175 INCA1Q0VD86 236 aa17■□□□□ 0.31
SNX5-214ENST00000490175 CROCCP2Q86T23 111 aa17■□□□□ 0.31
SNX5-214ENST00000490175 ARFGAP2Q8N6H7 521 aa17■□□□□ 0.31
SNX5-214ENST00000490175 OR2W6PQ8NHA6 318 aa17■□□□□ 0.31
SNX5-214ENST00000490175 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
SNX5-214ENST00000490175 AGAP1Q9UPQ3 857 aa17■□□□□ 0.31
SNX5-214ENST00000490175 GNEQ9Y223 722 aaKnown RBP17■□□□□ 0.31
SNX5-214ENST00000490175 SMIM35A0A1B0GVV1 85 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 TRIM66O15016 1216 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 HMGCRP04035 888 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 RARGP13631 454 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 LMNB2Q03252 620 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 SNX1Q13596 522 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 KCTD19Q17RG1 926 aaPredicted RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 PTPN20Q4JDL3 420 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 DENND2CQ68D51 928 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 FOXR1Q6PIV2 292 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 POLNQ7Z5Q5 900 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 HOOK3Q86VS8 718 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 SNF8Q96H20 258 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 HEMGNQ9BXL5 484 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 ELOVL4Q9GZR5 314 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 BARX2Q9UMQ3 279 aaPredicted RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 MBLAC1A4D2B0 266 aaPredicted RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 DYNC1LI2O43237 492 aaPredicted RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 KRT3P12035 628 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 OGDHQ02218 1023 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 ZNF268Q14587 947 aaPredicted RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 LLGL1Q15334 1064 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 CNGA2Q16280 664 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 DNAJC21Q5F1R6 531 aaKnown RBP16.99■□□□□ 0.31
SNX5-214ENST00000490175 CYP4A22Q5TCH4 519 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 SLC27A1Q6PCB7 646 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 ATG4AQ8WYN0 398 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 SLITRK1Q96PX8 696 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 FAM107BQ9H098 131 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 EPB41L4BQ9H329 900 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 ASIC3Q9UHC3 531 aa16.99■□□□□ 0.31
SNX5-214ENST00000490175 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.99■□□□□ 0.31
SNX5-214ENST00000490175 F8VP50 259 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 GPR32O75388 356 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 TJP3O95049 919 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 SMIM10L2AP0DMW4 78 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 SMIM10L2BP0DMW5 78 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 GJC1P36383 396 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 MAGEA9P43362 315 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 GABRB2P47870 512 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 MYO1EQ12965 1108 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 KIZQ2M2Z5 673 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 DRICH1Q6PGQ1 229 aaPredicted RBP16.98■□□□□ 0.31
SNX5-214ENST00000490175 BBOF1Q8ND07 529 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 KIF12Q96FN5 646 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 TWNKQ96RR1 684 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 CPA4Q9UI42 421 aa16.98■□□□□ 0.31
SNX5-214ENST00000490175 R3HDM2Q9Y2K5 976 aaKnown RBP16.98■□□□□ 0.31
SNX5-214ENST00000490175 EIF3HO15372 352 aaKnown RBP eCLIP16.97■□□□□ 0.31
SNX5-214ENST00000490175 KRT1P04264 644 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms