RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 EIF3DO15371 548 aaKnown RBP eCLIP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 TGFB1I1O43294 461 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 TMEM191BP0C7N4 346 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 HAPLN1P10915 354 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 ATF6P18850 670 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 ACAT1P24752 427 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 GABRR2P28476 465 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 TSPY1Q01534 308 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 CUL4BQ13620 913 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 VEPH1Q14D04 833 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 TAF12Q16514 161 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 GPR158Q5T848 1215 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 UNC13DQ70J99 1090 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 ARID3BQ8IVW6 561 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 MFSD6LQ8IWD5 586 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 SPPL2BQ8TCT7 592 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 C2orf15Q8WU43 125 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 SCFD1Q8WVM8 642 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 IRF7Q92985 503 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 NKD2Q969F2 451 aaPredicted RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 CHAMP1Q96JM3 812 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 PI4K2AQ9BTU6 479 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 BCO2Q9BYV7 579 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 SLC39A2Q9NP94 309 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 LTB4R2Q9NPC1 389 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 AGPAT3Q9NRZ7 376 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 INTS13Q9NVM9 706 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 DDX43Q9NXZ2 648 aaKnown RBP12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 PCDHB5Q9Y5E4 795 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 SNX9Q9Y5X1 595 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 NCANO14594 1321 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 PTPRJQ12913 1337 aa12.84□□□□□ -0.35
CCHCR1-215ENST00000488920 COL4A3Q01955 1670 aa12.83□□□□□ -0.35
CCHCR1-215ENST00000488920 PRR23AA6NEV1 266 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 SHISA7A6NL88 538 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 ZNF263O14978 683 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 HCRTO43612 131 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 FGF19O95750 216 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 TNNC2P02585 160 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 SP9P0CG40 484 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 TARSP26639 723 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 GPR15P49685 360 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 CYP2J2P51589 502 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 EHHADHQ08426 723 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 OSTM1Q86WC4 334 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 YAF2Q8IY57 180 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 CEP57L1Q8IYX8 460 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 TMEM86AQ8N2M4 240 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 DEPDC1BQ8WUY9 529 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 DNASE1L2Q92874 299 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 HPDLQ96IR7 371 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 ANKRD36BP1Q96IX9 119 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 LRRC3BQ96PB8 259 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 NELL2Q99435 816 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 ACBD6Q9BR61 282 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 MKNK1Q9BUB5 465 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 OSBPL6Q9BZF3 934 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 KIAA1586Q9HCI6 787 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 SPATA6Q9NWH7 488 aaPredicted RBP12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 GDAP2Q9NXN4 497 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 SERTAD1Q9UHV2 236 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 R3HCC1Q9Y3T6 440 aaKnown RBP12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 R4GN57 208 aa12.83□□□□□ -0.36
CCHCR1-215ENST00000488920 MYO15AQ9UKN7 3530 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 VPS13AQ96RL7 3174 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 PVALEFA0A1B0GWK0 134 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SLFN14P0C7P3 912 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 DLATP10515 647 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 CYP2F1P24903 491 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 CYP4F8P98187 520 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 MYO1EQ12965 1108 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SURF1Q15526 300 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SNRNP35Q16560 246 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 NFE2Q16621 373 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 CCDC142Q17RM4 750 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SOWAHAQ2M3V2 549 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 ARHGAP15Q53QZ3 475 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SDHAF4Q5VUM1 108 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 ADGRF2Q8IZF7 708 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 MAML2Q8IZL2 1156 aaPredicted RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 TOP6BLQ8N6T0 577 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 STKLD1Q8NE28 680 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 E2F7Q96AV8 911 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 CCDC127Q96BQ5 260 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 TASP1Q9H6P5 420 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 TRPV5Q9NQA5 729 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 GTF3C4Q9UKN8 822 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 NDRG2Q9UN36 371 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 MRPS17Q9Y2R5 130 aaKnown RBP12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
CCHCR1-215ENST00000488920 SCN1AP35498 2009 aa12.81□□□□□ -0.36
CCHCR1-215ENST00000488920 MAN2B1O00754 1011 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms