RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 OR6C75A6NL08 312 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CCL16O15467 120 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 FGFR1OPO95684 399 aaKnown RBP18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CALCAP01258 141 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 C8AP07357 584 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CD58P19256 250 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 PTMSP20962 102 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 GPR15P49685 360 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CREMQ03060 361 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 PTPN21Q16825 1174 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 LEXMQ3ZCV2 418 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 SDHAF4Q5VUM1 108 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 PPFIBP1Q86W92 1011 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 THEM5Q8N1Q8 247 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 ZNF461Q8TAF7 563 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 SYT15Q9BQS2 421 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 COQ4Q9Y3A0 265 aa18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 USP15Q9Y4E8 981 aaPredicted RBP18.35■□□□□ 0.53
SHROOM1-205ENST00000488072 CCDC195A0A1B0GUA6 201 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 SPDYE4A6NLX3 237 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 MBTPS2O43462 519 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 STX10O60499 249 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 ZMYND10O75800 440 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 SLC9A1P19634 815 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 SP100P23497 879 aaPredicted RBP18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 GPR17Q13304 367 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 TMEM86AQ8N2M4 240 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 WHAMMQ8TF30 809 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 NECAB3Q96P71 396 aaPredicted RBP18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 SNX25Q9H3E2 840 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 HCFC1R1Q9NWW0 138 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 AJAP1Q9UKB5 411 aaPredicted RBP18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 COG5Q9UP83 839 aa18.34■□□□□ 0.53
SHROOM1-205ENST00000488072 A8MXQ7 604 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 NCK2O43639 380 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 TACC1O75410 805 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 PRKCSHP14314 528 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 PAX3P23760 479 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 NDST1P52848 882 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 MYL5Q02045 173 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 IQCB1Q15051 598 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 KRT31Q15323 416 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 TCP11X2Q5H9J9 407 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 MDH1BQ5I0G3 518 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 CT47A1Q5JQC4 288 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 PTCRAQ6ISU1 281 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 RRAGAQ7L523 313 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 DPH6Q7L8W6 267 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 SMRP1Q8NCR6 262 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 EHBP1Q8NDI1 1231 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 GPR152Q8TDT2 470 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 TUBGCP2Q9BSJ2 902 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 BCO2Q9BYV7 579 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 VPS16Q9H269 839 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 CBX8Q9HC52 389 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 ABI2Q9NYB9 513 aaPredicted RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 AFF4Q9UHB7 1163 aaKnown RBP18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 XIRP2A4UGR9 3374 aa18.33■□□□□ 0.52
SHROOM1-205ENST00000488072 CLDN5O00501 218 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 ATF2P15336 505 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 CYP2F1P24903 491 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 KLK7P49862 253 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 CACNA2D1P54289 1103 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 VWA3BQ502W6 1294 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 ZNF394Q53GI3 561 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 PPM1LQ5SGD2 360 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 ACOT1Q86TX2 421 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 HS6ST3Q8IZP7 471 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 ST13P5Q8NFI4 369 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 TAF4BQ92750 862 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 MYLPFQ96A32 169 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 ACBD6Q9BR61 282 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 MAGEC2Q9UBF1 373 aaPredicted RBP18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 YIPF1Q9Y548 306 aa18.32■□□□□ 0.52
SHROOM1-205ENST00000488072 PRRG1O14668 218 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 LETM1O95202 739 aaPredicted RBP18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 BMP1P13497 986 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 ZNF18P17022 549 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 PTPN1P18031 435 aaKnown RBP18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 LHX1P48742 406 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 ZNF165P49910 485 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 KCNMA1Q12791 1236 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 TWF1Q12792 350 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 MAN2A1Q16706 1144 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 PHLDB3Q6NSJ2 640 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 DPY19L2P1Q6NXN4 242 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 FAM171BQ6P995 826 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 POTEHQ6S545 545 aa18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 APTXQ7Z2E3 356 aaKnown RBP18.31■□□□□ 0.52
SHROOM1-205ENST00000488072 GPR149Q86SP6 731 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms