RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 TSTD1Q8NFU3 115 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 ETNPPLQ8TBG4 499 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 PIP4K2CQ8TBX8 421 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 ACDQ96AP0 544 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 GTPBP2Q9BX10 602 aaKnown RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 LRRC2Q9BYS8 371 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 GOLGA2P5Q9HBQ8 144 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 POLMQ9NP87 494 aaPredicted RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 GKN1Q9NS71 199 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 EVA1BQ9NVM1 165 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 DNAAF2Q9NVR5 837 aaKnown RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 RBM28Q9NW13 759 aaKnown RBP9.09□□□□□ -0.95
XRN1-212ENST00000486211 TPCN1Q9ULQ1 816 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MAFFQ9ULX9 164 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 TBX20Q9UMR3 447 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 YIPF1Q9Y548 306 aa9.09□□□□□ -0.95
XRN1-212ENST00000486211 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 ZBTB39O15060 712 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 TRAPPC3O43617 180 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 ITPKBP27987 946 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 HOXD12P35452 270 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 P2RY2P41231 377 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 USP11P51784 963 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 HDAC1Q13547 482 aaPredicted RBP9.08□□□□□ -0.96
XRN1-212ENST00000486211 TFDP1Q14186 410 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 GLRA4Q5JXX5 417 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 GPR158Q5T848 1215 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 TRIM68Q6AZZ1 485 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 ANO7Q6IWH7 933 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 LPCAT2Q7L5N7 544 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 GLRX5Q86SX6 157 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 TMEFF1Q8IYR6 380 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 FRMD1Q8N878 549 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 BEST2Q8NFU1 509 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 P2RY13Q9BPV8 354 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 CRISPLD1Q9H336 500 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 EBF3Q9H4W6 596 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 PDZD7Q9H5P4 517 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 C6orf50Q9HD87 102 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 PTPN13Q12923 2485 aa9.08□□□□□ -0.96
XRN1-212ENST00000486211 USP9XQ93008 2570 aaPredicted RBP9.08□□□□□ -0.96
XRN1-212ENST00000486211 PLXND1Q9Y4D7 1925 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 MUC22E2RYF6 1773 aaPredicted RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 GON4LQ3T8J9 2241 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 PTPRQQ9UMZ3 2332 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 CYP3A7-CYP3A51PA0A087WV96 503 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 ANTXRLA6NF34 631 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 TRABD2BA6NFA1 517 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 H7C4K7 107 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 PYCARD-AS1I3L0S3 204 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 SYN3O14994 580 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 CBFA2T3O75081 653 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 DKK1O94907 266 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 TDP2O95551 362 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 CFIP05156 583 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 SERPINF2P08697 491 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 HNRNPLP14866 589 aaKnown RBP eCLIP9.07□□□□□ -0.96
XRN1-212ENST00000486211 ARSAP15289 507 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 GLRA2P23416 452 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 ITPKAP23677 461 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 CYP3A7P24462 503 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 YWHABP31946 246 aaKnown RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 ARL2P36404 184 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 ATXN3P54252 364 aaPredicted RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 CFHR1Q03591 330 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 GFPT1Q06210 699 aaPredicted RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 SOX4Q06945 474 aaPredicted RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 RTN1Q16799 776 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 CTXN3Q4LDR2 81 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 SPDYCQ5MJ68 293 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 C4orf19Q8IY42 314 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 RIN3Q8TB24 985 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 RLN3Q8WXF3 142 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 UROC1Q96N76 676 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 SMG9Q9H0W8 520 aaKnown RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 THG1LQ9NWX6 298 aaKnown RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 KIAA1522Q9P206 1035 aaPredicted RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 NXF1Q9UBU9 619 aaKnown RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
XRN1-212ENST00000486211 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
XRN1-212ENST00000486211 P4HBP07237 508 aaKnown RBP9.06□□□□□ -0.96
XRN1-212ENST00000486211 CDC27P30260 824 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 GJA4P35212 333 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 DPP6P42658 865 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 KCNH2Q12809 1159 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 SLC14A1Q13336 389 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 PPP2R5CQ13362 524 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 DUOXA1Q1HG43 343 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 LYSMD4Q5XG99 296 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 TRIM46Q7Z4K8 759 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 NOSTRINQ8IVI9 506 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 NAXDQ8IW45 347 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 USP33Q8TEY7 942 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 BAP1Q92560 729 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 PRIMPOLQ96LW4 560 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 LXNQ9BS40 222 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 ATXN3LQ9H3M9 355 aa9.06□□□□□ -0.96
XRN1-212ENST00000486211 FZD8Q9H461 694 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms