RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 PARD3BQ8TEW8 1205 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 C2orf15Q8WU43 125 aaKnown RBP19.76■□□□□ 0.75
COL1A1-206ENST00000485870 TMEM174Q8WUU8 243 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 MMS19Q96T76 1030 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 ACBD6Q9BR61 282 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 RPP25Q9BUL9 199 aaKnown RBP19.76■□□□□ 0.75
COL1A1-206ENST00000485870 FBXL21Q9UKT6 434 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 FRMD4BQ9Y2L6 1034 aa19.76■□□□□ 0.75
COL1A1-206ENST00000485870 CLSTN1O94985 981 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 CFHP08603 1231 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 GJA1P17302 382 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 NR2F2P24468 414 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 LHX1P48742 406 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 TUFMP49411 452 aaKnown RBP19.75■□□□□ 0.75
COL1A1-206ENST00000485870 MYL6P60660 151 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 DLG4P78352 724 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 SMARCB1Q12824 385 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 INTS6LQ5JSJ4 861 aaKnown RBP19.75■□□□□ 0.75
COL1A1-206ENST00000485870 POTEHQ6S545 545 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 LEMD2Q8NC56 503 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 SPATA18Q8TC71 538 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 FAM200AQ8TCP9 573 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 KXD1Q9BQD3 176 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 LPIN3Q9BQK8 851 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 RMND1Q9NWS8 449 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 GDE1Q9NZC3 331 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 HSFX1Q9UBD0 423 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 PCDHB5Q9Y5E4 795 aa19.75■□□□□ 0.75
COL1A1-206ENST00000485870 GABRDO14764 452 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 GADD45BO75293 160 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-206ENST00000485870 MOSPD3O75425 235 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 SMC2O95347 1197 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 HAPLN1P10915 354 aaPredicted RBP19.74■□□□□ 0.75
COL1A1-206ENST00000485870 SRFP11831 508 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 ATF6P18850 670 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 PCSK1P29120 753 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 ANP32AP39687 249 aaKnown RBP19.74■□□□□ 0.75
COL1A1-206ENST00000485870 EPHA5P54756 1037 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 CCDC142Q17RM4 750 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 TDRD10Q5VZ19 366 aaKnown RBP19.74■□□□□ 0.75
COL1A1-206ENST00000485870 DPH6Q7L8W6 267 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 LIMS2Q7Z4I7 341 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 TMC8Q8IU68 726 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 KBTBD7Q8WVZ9 684 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 SMARCE1Q969G3 411 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 TIGD1Q96MW7 591 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 PI4K2AQ9BTU6 479 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 CHMP5Q9NZZ3 219 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 HOOK1Q9UJC3 728 aaKnown RBP19.74■□□□□ 0.75
COL1A1-206ENST00000485870 ASB3Q9Y575 518 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 MUC6Q6W4X9 2439 aa19.74■□□□□ 0.75
COL1A1-206ENST00000485870 MICAL2O94851 1124 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 AP3M2P53677 418 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 TNNC1P63316 161 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 VEPH1Q14D04 833 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 TEAD2Q15562 447 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 NFE2Q16621 373 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-206ENST00000485870 WDR72Q3MJ13 1102 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 DNAJB7Q7Z6W7 309 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-206ENST00000485870 ITIH5Q86UX2 942 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 SHKBP1Q8TBC3 707 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 GPR152Q8TDT2 470 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 GIPC2Q8TF65 315 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 PSMG2Q969U7 264 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 GSDMAQ96QA5 445 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 LRRC3Q9BY71 257 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 MFSD1Q9H3U5 465 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 ZNF334Q9HCZ1 680 aaPredicted RBP19.73■□□□□ 0.75
COL1A1-206ENST00000485870 NXF1Q9UBU9 619 aaKnown RBP19.73■□□□□ 0.75
COL1A1-206ENST00000485870 GTF3C4Q9UKN8 822 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 PCDHA5Q9Y5H7 936 aa19.73■□□□□ 0.75
COL1A1-206ENST00000485870 A0A1W2PRU2 124 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 KINO60870 393 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 AKAP3O75969 853 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 C4BPAP04003 597 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 WARSP23381 471 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 LMO2P25791 158 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 RPL13P26373 211 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 GPR15P49685 360 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 VCPP55072 806 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 PSMC1P62191 440 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 CLDN10P78369 228 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 NFIL3Q16649 462 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 ZCWPW2Q504Y3 356 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 ZNF658Q5TYW1 1059 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 SIX5Q8N196 739 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 TMC2Q8TDI7 906 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 SYAP1Q96A49 352 aaPredicted RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 ELMO3Q96BJ8 720 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 PKMYT1Q99640 499 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 SYT15Q9BQS2 421 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 MRPL45Q9BRJ2 306 aaKnown RBP19.72■□□□□ 0.75
COL1A1-206ENST00000485870 XYLT2Q9H1B5 865 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 SLITRK6Q9H5Y7 841 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 CA14Q9ULX7 337 aa19.72■□□□□ 0.75
COL1A1-206ENST00000485870 MYBPHLA2RUH7 354 aa19.71■□□□□ 0.75
COL1A1-206ENST00000485870 ATP2C2O75185 946 aa19.71■□□□□ 0.75
COL1A1-206ENST00000485870 VNN1O95497 513 aa19.71■□□□□ 0.75
COL1A1-206ENST00000485870 PDGFRBP09619 1106 aa19.71■□□□□ 0.75
COL1A1-206ENST00000485870 ATICP31939 592 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms