RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC8A3P57103 927 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 NOP14P78316 857 aaKnown RBP8.84□□□□□ -0.99
SF3A1-208ENST00000485618 ITIH3Q06033 890 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 GPR17Q13304 367 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 EXOC3L4Q17RC7 722 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 WSCD1Q658N2 575 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PRSS55Q6UWB4 352 aaPredicted RBP8.84□□□□□ -0.99
SF3A1-208ENST00000485618 TMEM184AQ6ZMB5 413 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PALB2Q86YC2 1186 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 EHBP1Q8NDI1 1231 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PLEKHO2Q8TD55 490 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 AUTS2Q8WXX7 1259 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 CLSTN3Q9BQT9 956 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 NIF3L1Q9GZT8 377 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 NDST4Q9H3R1 872 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 FANCLQ9NW38 375 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 ZDHHC7Q9NXF8 308 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 EHD2Q9NZN4 543 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 HSFX1Q9UBD0 423 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 AFF4Q9UHB7 1163 aaKnown RBP8.84□□□□□ -0.99
SF3A1-208ENST00000485618 FBXL5Q9UKA1 691 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 KIAA1257Q9ULG3 409 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 DAAM1Q9Y4D1 1078 aa8.84□□□□□ -0.99
SF3A1-208ENST00000485618 PDCD11Q14690 1871 aaKnown RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 LRRC10BA6NIK2 292 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 C19orf67A6NJJ6 358 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 PPEF2O14830 753 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 TBX10O75333 385 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 VNN1O95497 513 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SERPINC1P01008 464 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 HNRNPA1P09651 372 aaKnown RBP eCLIP8.83□□□□□ -1
SF3A1-208ENST00000485618 ATF2P15336 505 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 RFX1P22670 979 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 LTBRP36941 435 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 CLCN4P51793 760 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 EPHB3P54753 998 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 MFAP3P55082 362 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 RPL10AP62906 217 aaKnown RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 NHLH1Q02575 133 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 HYAL1Q12794 435 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 ADAM15Q13444 863 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SMAD4Q13485 552 aaKnown RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 TAF12Q16514 161 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SOWAHAQ2M3V2 549 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 ATAT1Q5SQI0 421 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 C1orf220Q5T0J3 134 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 CDKAL1Q5VV42 579 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 IQCEQ6IPM2 695 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 LRSAM1Q6UWE0 723 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 HFE2Q6ZVN8 426 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 FMNL3Q8IVF7 1028 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 AOPEPQ8N6M6 819 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 KREMEN2Q8NCW0 462 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 CXorf38Q8TB03 319 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 FAM200AQ8TCP9 573 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SPPL2BQ8TCT7 592 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 TAS1R2Q8TE23 839 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SLC22A17Q8WUG5 538 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 B3GALT6Q96L58 329 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 PCMTD1Q96MG8 357 aaPredicted RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 RIPOR3Q96MK2 946 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 NECTIN4Q96NY8 510 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 GZF1Q9H116 711 aaPredicted RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 XYLT2Q9H1B5 865 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SFXN1Q9H9B4 322 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 PIDD1Q9HB75 910 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 ABCB6Q9NP58 842 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 SAMSN1Q9NSI8 373 aaKnown RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 LIMA1Q9UHB6 759 aaKnown RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 MUTYHQ9UIF7 546 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 BARX2Q9UMQ3 279 aaPredicted RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 L1RE1Q9UN81 338 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 PCDHB5Q9Y5E4 795 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 TIMM13Q9Y5L4 95 aaPredicted RBP8.83□□□□□ -1
SF3A1-208ENST00000485618 HCFC2Q9Y5Z7 792 aa8.83□□□□□ -1
SF3A1-208ENST00000485618 GABRDO14764 452 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 LINC01565O15544 149 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 MBTPS2O43462 519 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 TGM5O43548 720 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 TBC1D4O60343 1298 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 ABLIM3O94929 683 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 LRG1P02750 347 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 HOXA9P31269 272 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 GTF2F1P35269 517 aaKnown RBP eCLIP8.82□□□□□ -1
SF3A1-208ENST00000485618 MTHFRP42898 656 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 BPIFB4P59827 614 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 GCNT1Q02742 428 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 DLX2Q07687 328 aaPredicted RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 ADCY1Q08828 1119 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CUL2Q13617 745 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 VEPH1Q14D04 833 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 SMAD2Q15796 467 aaKnown RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 CTC1Q2NKJ3 1217 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CBWD6Q4V339 395 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 INTS6LQ5JSJ4 861 aaKnown RBP8.82□□□□□ -1
SF3A1-208ENST00000485618 CBWD3Q5JTY5 395 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 CBWD5Q5RIA9 395 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 PPM1LQ5SGD2 360 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 LLGL2Q6P1M3 1020 aa8.82□□□□□ -1
SF3A1-208ENST00000485618 LILRA6Q6PI73 481 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms