RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 SCN1AP35498 2009 aa17.77■□□□□ 0.43
HMGN1-214ENST00000482733 VCANP13611 3396 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 CCL16O15467 120 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 ASS1P00966 412 aaKnown RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 ERCC5P28715 1186 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 TUFMP49411 452 aaKnown RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 INTS6LQ5JSJ4 861 aaKnown RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 CCDC183Q5T5S1 534 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 OSTM1Q86WC4 334 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 ELMOD1Q8N336 334 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 SPPL2BQ8TCT7 592 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 TAS1R2Q8TE23 839 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 NECAB3Q96P71 396 aaPredicted RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
HMGN1-214ENST00000482733 CDH22Q9UJ99 828 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 CDH9Q9ULB4 789 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 POLIQ9UNA4 740 aa17.76■□□□□ 0.43
HMGN1-214ENST00000482733 PLXNA3P51805 1871 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 CLUHO75153 1309 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 LOC730098B7Z3J9 87 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 CCDC192P0DO97 292 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 PTMSP20962 102 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 SSTR3P32745 418 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 GNL1P36915 607 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 ALDH1A3P47895 512 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 MARSP56192 900 aaKnown RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 DUSP4Q13115 394 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 MAPRE1Q15691 268 aaKnown RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 DPCR1Q3MIW9 517 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 OTOP3Q7RTS5 596 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 LRRTM3Q86VH5 581 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 ATAD1Q8NBU5 361 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 FBXL13Q8NEE6 735 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 OR6B3Q8NGW1 331 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 SLC35C1Q96A29 364 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 ACSF2Q96CM8 615 aaPredicted RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 FAXDC2Q96IV6 333 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 RPGRIP1Q96KN7 1286 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 MRPL45Q9BRJ2 306 aaKnown RBP17.75■□□□□ 0.43
HMGN1-214ENST00000482733 YIPF1Q9Y548 306 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 PCDHB5Q9Y5E4 795 aa17.75■□□□□ 0.43
HMGN1-214ENST00000482733 N4BP1O75113 896 aaKnown RBP17.74■□□□□ 0.43
HMGN1-214ENST00000482733 VNN2O95498 520 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 PTPN2P17706 415 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 ACAT1P24752 427 aaKnown RBP17.74■□□□□ 0.43
HMGN1-214ENST00000482733 TWF1Q12792 350 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 IQCEQ6IPM2 695 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 GRASPQ7Z6J2 395 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-214ENST00000482733 PLCD3Q8N3E9 789 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 ZNF512Q96ME7 567 aaPredicted RBP17.74■□□□□ 0.43
HMGN1-214ENST00000482733 SYT15Q9BQS2 421 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 ABCB6Q9NP58 842 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 RAB20Q9NX57 234 aa17.74■□□□□ 0.43
HMGN1-214ENST00000482733 PMM2O15305 246 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 LMO2P25791 158 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 EPHB3P54753 998 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 NOP14P78316 857 aaKnown RBP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 CETN1Q12798 172 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 TPD52L1Q16890 204 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 MGAT5BQ3V5L5 792 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 WDR44Q5JSH3 913 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 FAM171BQ6P995 826 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 SASS6Q6UVJ0 657 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 C4orf50Q6ZRC1 276 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 TDRD5Q8NAT2 981 aaKnown RBP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 LEMD2Q8NC56 503 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 FEZF2Q8TBJ5 459 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 FUBP3Q96I24 572 aaKnown RBP eCLIP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 PKMYT1Q99640 499 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 CRISPLD1Q9H336 500 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 SMYD3Q9H7B4 428 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 CYP3A43Q9HB55 503 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 AVENQ9NQS1 362 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 ABI2Q9NYB9 513 aaPredicted RBP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.73■□□□□ 0.43
HMGN1-214ENST00000482733 SLC27A5Q9Y2P5 690 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 COQ4Q9Y3A0 265 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 ASB3Q9Y575 518 aa17.73■□□□□ 0.43
HMGN1-214ENST00000482733 TSC2P49815 1807 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 A8MXQ7 604 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TNFRSF10AO00220 468 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 DLL1O00548 723 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 P4HA2O15460 535 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 PDGFRBP09619 1106 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 HAPLN1P10915 354 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TRIM21P19474 475 aaKnown RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 FSHRP23945 695 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 CFAP221Q4G0U5 840 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 CBWD6Q4V339 395 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 PABPC1LQ4VXU2 614 aaKnown RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 CBWD3Q5JTY5 395 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 CBWD5Q5RIA9 395 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 SPOPLQ6IQ16 392 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 ITIH5Q86UX2 942 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 SPATA2LQ8IUW3 424 aaPredicted RBP17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TRIM59Q8IWR1 403 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 ZDHHC14Q8IZN3 488 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TTC39CQ8N584 583 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 TNIP3Q96KP6 325 aa17.72■□□□□ 0.43
HMGN1-214ENST00000482733 SEPT5Q99719 369 aaPredicted RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms