RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CASP1P29466 404 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 HOXD13P35453 343 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 TUFMP49411 452 aaKnown RBP19.99■□□□□ 0.79
CLK1-211ENST00000481641 ASIC1P78348 528 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 CSTF1Q05048 431 aaKnown RBP19.99■□□□□ 0.79
CLK1-211ENST00000481641 ITIH5Q86UX2 942 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 GPD1LQ8N335 351 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 PDCL2Q8N4E4 241 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 SPRYD3Q8NCJ5 442 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 CACTINQ8WUQ7 758 aaKnown RBP19.99■□□□□ 0.79
CLK1-211ENST00000481641 NELL2Q99435 816 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 MTMR12Q9C0I1 747 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 IL21Q9HBE4 155 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 SIX4Q9UIU6 781 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 PIAS3Q9Y6X2 628 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 SPTBN4Q9H254 2564 aa19.99■□□□□ 0.79
CLK1-211ENST00000481641 ARNTLO00327 626 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 HCRTO43612 131 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 YEATS4O95619 227 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 LMNAP02545 664 aaKnown RBP19.98■□□□□ 0.79
CLK1-211ENST00000481641 ACAT1P24752 427 aaKnown RBP19.98■□□□□ 0.79
CLK1-211ENST00000481641 PNPLA4P41247 253 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 GPR15P49685 360 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 VEPH1Q14D04 833 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 CCDC142Q17RM4 750 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 TSSK4Q6SA08 328 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 OSTM1Q86WC4 334 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 CBWD2Q8IUF1 395 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 YAF2Q8IY57 180 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 DCP1BQ8IZD4 617 aaKnown RBP19.98■□□□□ 0.79
CLK1-211ENST00000481641 ZNF687Q8N1G0 1237 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 TTC8Q8TAM2 541 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 ZFYVE19Q96K21 471 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 PI4K2AQ9BTU6 479 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 MRPS17Q9Y2R5 130 aaKnown RBP19.98■□□□□ 0.79
CLK1-211ENST00000481641 PTPRJQ12913 1337 aa19.98■□□□□ 0.79
CLK1-211ENST00000481641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.97■□□□□ 0.79
CLK1-211ENST00000481641 MAN2B1O00754 1011 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 NCAM2O15394 837 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 ZSCAN22P10073 491 aaPredicted RBP19.97■□□□□ 0.79
CLK1-211ENST00000481641 SOX9P48436 509 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 PKP1Q13835 747 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 ARHGAP15Q53QZ3 475 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 SDHAF4Q5VUM1 108 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 HSCBQ8IWL3 235 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 OR5B17Q8NGF7 314 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 SPPL2BQ8TCT7 592 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 C2orf15Q8WU43 125 aaKnown RBP19.97■□□□□ 0.79
CLK1-211ENST00000481641 FAM3CQ92520 227 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 LRRC27Q9C0I9 530 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 SMG9Q9H0W8 520 aaKnown RBP19.97■□□□□ 0.79
CLK1-211ENST00000481641 TRPV5Q9NQA5 729 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 DDX43Q9NXZ2 648 aaKnown RBP19.97■□□□□ 0.79
CLK1-211ENST00000481641 ITGA11Q9UKX5 1188 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 PCDHB5Q9Y5E4 795 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 SNX9Q9Y5X1 595 aa19.97■□□□□ 0.79
CLK1-211ENST00000481641 POLR2DO15514 142 aaKnown RBP19.96■□□□□ 0.79
CLK1-211ENST00000481641 HUS1O60921 280 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 PRAMEF12O95522 483 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 F13A1P00488 732 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 TMEM191BP0C7N4 346 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 CCNE1P24864 410 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 MAGEA9P43362 315 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 RPS9P46781 194 aaKnown RBP19.96■□□□□ 0.79
CLK1-211ENST00000481641 RBP5P82980 135 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 TSPY1Q01534 308 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 MTAPQ13126 283 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 TAF12Q16514 161 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 ZC3H14Q6PJT7 736 aaKnown RBP19.96■□□□□ 0.79
CLK1-211ENST00000481641 LRRC52Q8N7C0 313 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 IQUBQ8NA54 791 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 E2F7Q96AV8 911 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 BLZF1Q9H2G9 400 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 SEMA4AQ9H3S1 761 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 CUEDC2Q9H467 287 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 HSPBP1Q9NZL4 362 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 FBXO4Q9UKT5 387 aa19.96■□□□□ 0.79
CLK1-211ENST00000481641 NUP210Q8TEM1 1887 aaPredicted RBP19.95■□□□□ 0.78
CLK1-211ENST00000481641 ZNF233A6NK53 670 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 SLC38A8A6NNN8 435 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 DPYSL4O14531 572 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 CHADO15335 359 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 PRPF40AO75400 957 aaKnown RBP19.95■□□□□ 0.78
CLK1-211ENST00000481641 FGF19O95750 216 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 HSP90AA1P07900 732 aaKnown RBP19.95■□□□□ 0.78
CLK1-211ENST00000481641 AMPD3Q01432 767 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 FCHO2Q0JRZ9 810 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 SMARCB1Q12824 385 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 FAM26FQ5R3K3 315 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 STXBP4Q6ZWJ1 553 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 EPM2AIP1Q7L775 607 aaPredicted RBP19.95■□□□□ 0.78
CLK1-211ENST00000481641 NELFCDQ8IXH7 590 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 RDH13Q8NBN7 331 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 CSGALNACT1Q8TDX6 532 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 ANKRD36BP1Q96IX9 119 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 C7orf25Q9BPX7 421 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 SLC46A2Q9BY10 475 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 TASP1Q9H6P5 420 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 LMAN1LQ9HAT1 526 aa19.95■□□□□ 0.78
CLK1-211ENST00000481641 INTS13Q9NVM9 706 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms