RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 RYBPQ8N488 228 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 CYFIP2Q96F07 1278 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 ARHGAP28Q9P2N2 729 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 PPARGP37231 505 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 C11orf63Q6NUN7 778 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 MAGED2Q9UNF1 606 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 RECQL4O94761 1208 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 ADRB2P07550 413 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 PLEKP08567 350 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 FGFR4P22455 802 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 ATN1P54259 1190 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 RNF219Q5W0B1 726 aaPredicted RBP20.26■□□□□ 0.83
CCM2-214ENST00000481194 GIT1Q9Y2X7 761 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 MOXD2PA6NHM9 499 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 TGFB1I1O43294 461 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 AP5Z1O43299 807 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 POU5F1BQ06416 359 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 CRHR2Q13324 411 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 TSHZ1Q6ZSZ6 1077 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 TATDN2Q93075 761 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 SP110Q9HB58 689 aa20.26■□□□□ 0.83
CCM2-214ENST00000481194 CNTNAP2Q9UHC6 1331 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 LGR5O75473 907 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 SLC7A5Q01650 507 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 NBPF20Q3BBV1 942 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 FAM124BQ9H5Z6 455 aaPredicted RBP20.25■□□□□ 0.83
CCM2-214ENST00000481194 CATSPERBQ9H7T0 1116 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 RRN3Q9NYV6 651 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 LY75O60449 1722 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 LLGL1Q15334 1064 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CBWD6Q4V339 395 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CBWD3Q5JTY5 395 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CBWD5Q5RIA9 395 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 TRIM42Q8IWZ5 723 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 GLIS3Q8NEA6 775 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 NFU1Q9UMS0 254 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CSDE1O75534 798 aaKnown RBP20.25■□□□□ 0.83
CCM2-214ENST00000481194 URODP06132 367 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CTXN3Q4LDR2 81 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 C6orf118Q5T5N4 469 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CD99L2Q8TCZ2 262 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 CDK5RAP1Q96SZ6 601 aaKnown RBP20.25■□□□□ 0.83
CCM2-214ENST00000481194 ZSWIM1Q9BR11 485 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 FOXP3Q9BZS1 431 aa20.25■□□□□ 0.83
CCM2-214ENST00000481194 DDX20Q9UHI6 824 aaKnown RBP20.25■□□□□ 0.83
CCM2-214ENST00000481194 CYBBP04839 570 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 EIF3EP60228 445 aaKnown RBP20.24■□□□□ 0.83
CCM2-214ENST00000481194 SLC47A2Q86VL8 602 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 KPNA7A9QM74 516 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 ZMYND10O75800 440 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 RAG1P15918 1043 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 BBS9Q3SYG4 887 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 SPOPLQ6IQ16 392 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 SYT15Q9BQS2 421 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 AVENQ9NQS1 362 aaPredicted RBP20.24■□□□□ 0.83
CCM2-214ENST00000481194 SNX24Q9Y343 169 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 EEF2KO00418 725 aaKnown RBP20.24■□□□□ 0.83
CCM2-214ENST00000481194 AKAP5P24588 427 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 RPL9P32969 192 aaKnown RBP20.24■□□□□ 0.83
CCM2-214ENST00000481194 ANO4Q32M45 955 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 CNOT10Q9H9A5 744 aaKnown RBP20.24■□□□□ 0.83
CCM2-214ENST00000481194 PCDHB12Q9Y5F1 795 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 TLL2Q9Y6L7 1015 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 MCL1Q07820 350 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 ADAM2Q99965 735 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 DPP7Q9UHL4 492 aa20.24■□□□□ 0.83
CCM2-214ENST00000481194 RAP1GAPP47736 663 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 POU5F1Q01860 360 aaKnown RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 PPP3CAQ08209 521 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 ZNF268Q14587 947 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 PDK2Q15119 407 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 YME1L1Q96TA2 773 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 MAGEB5Q9BZ81 275 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 DDX47Q9H0S4 455 aaKnown RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 MTSS1O43312 755 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 PNMA6AP0CW24 399 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 RECQLP46063 649 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 EPHB1P54762 984 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 ASPHQ12797 758 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 NR1H3Q13133 447 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 PLD1Q13393 1074 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 IKBKEQ14164 716 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 ZNF792Q3KQV3 632 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 ABCB6Q9NP58 842 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 TRIM10Q9UDY6 481 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 MOCS2O96007 188 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 DARSP14868 501 aaKnown RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 CAPN12Q6ZSI9 719 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 EPM2AIP1Q7L775 607 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 IQANK1A0A1B0GTG1 560 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 NDUFAB1O14561 156 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 RNF40O75150 1001 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 MXRA7P84157 204 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 PDE1BQ01064 536 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 KLHL38Q2WGJ6 581 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 EPC2Q52LR7 807 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 GJC2Q5T442 439 aaPredicted RBP20.23■□□□□ 0.83
CCM2-214ENST00000481194 SLC7A14Q8TBB6 771 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 OSBPL8Q9BZF1 889 aa20.23■□□□□ 0.83
CCM2-214ENST00000481194 DDX43Q9NXZ2 648 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms