RNA–Protein interactions for RNA: ENST00000479414.1

CCDC58-204, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3

Gene CCDC58, Length 431 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-204ENST00000479414 PEX2P28328 305 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 NEK3P51956 506 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 FPGSQ05932 587 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 LCE5AQ5TCM9 118 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 TAF2Q6P1X5 1199 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 ZNF783Q6ZMS7 281 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 Q6ZPA2 131 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 MICALCLQ6ZW33 695 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 USP51Q70EK9 711 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 AMER2Q8N7J2 671 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 TMEM125Q96AQ2 219 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 APIPQ96GX9 242 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 HEPHQ9BQS7 1158 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 SRRDQ9UH36 339 aa6.72□□□□□ -1.33
CCDC58-204ENST00000479414 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.72□□□□□ -1.33
CCDC58-204ENST00000479414 TRGV11A0A075B6L2 103 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 A0A087WWL8 130 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 BTN3A1O00481 513 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 MGEA5O60502 916 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 VPS4BO75351 444 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 MYL3P08590 195 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 MYF5P13349 255 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 VIPR2P41587 438 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SLC11A2P49281 568 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 TAP1Q03518 808 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 BOP1Q14137 746 aaKnown RBP6.71□□□□□ -1.34
CCDC58-204ENST00000479414 AMOTQ4VCS5 1084 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SYCP2LQ5T4T6 812 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 PPP4R4Q6NUP7 873 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SLC30A10Q6XR72 485 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SLC39A13Q96H72 371 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 LRRC27Q9C0I9 530 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SMOC2Q9H3U7 446 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 SMURF2Q9HAU4 748 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 INTS13Q9NVM9 706 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 TBCCD1Q9NVR7 557 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 STK32BQ9NY57 414 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 RAD54BQ9Y620 910 aa6.71□□□□□ -1.34
CCDC58-204ENST00000479414 GRID2IPA4D2P6 1211 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 TGM1P22735 817 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 GDF5P43026 501 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 GCLCP48506 637 aaPredicted RBP6.7□□□□□ -1.34
CCDC58-204ENST00000479414 UCP3P55916 312 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 SAFBQ15424 915 aaKnown RBP eCLIP6.7□□□□□ -1.34
CCDC58-204ENST00000479414 CNGA2Q16280 664 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 CD300EQ496F6 205 aaPredicted RBP6.7□□□□□ -1.34
CCDC58-204ENST00000479414 LONRF3Q496Y0 759 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 PREPLQ4J6C6 727 aaPredicted RBP6.7□□□□□ -1.34
CCDC58-204ENST00000479414 ZNF627Q7L945 461 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 KRT78Q8N1N4 520 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 LNX2Q8N448 690 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 PARD3BQ8TEW8 1205 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 SNX19Q92543 992 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 COQ10AQ96MF6 247 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 NAA15Q9BXJ9 866 aaKnown RBP6.7□□□□□ -1.34
CCDC58-204ENST00000479414 KRTAP4-9Q9BYQ8 210 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 SYBUQ9NX95 663 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 TMX2Q9Y320 296 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 PAXBP1Q9Y5B6 917 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 COL4A3Q01955 1670 aa6.7□□□□□ -1.34
CCDC58-204ENST00000479414 DCLK1O15075 740 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 PQBP1O60828 265 aaKnown RBP6.69□□□□□ -1.34
CCDC58-204ENST00000479414 SRGNP10124 158 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 ITGAMP11215 1152 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 CHRM3P20309 590 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 GATA3P23771 443 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 NPTX2P47972 431 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 NDUFV1P49821 464 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 SUMO3P55854 103 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-204ENST00000479414 WNT3P56703 355 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 LMBRD2Q68DH5 695 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-204ENST00000479414 Q6YL49 198 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 VRK3Q8IV63 474 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 FAM9AQ8IZU1 332 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-204ENST00000479414 LCORLQ8N3X6 602 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 NEU4Q8WWR8 484 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-204ENST00000479414 LINC00476Q8WZB0 136 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 MAML1Q92585 1016 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 SLC46A1Q96NT5 459 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 MOGAT1Q96PD6 335 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 OSBPL9Q96SU4 736 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 PRRX2Q99811 253 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 BTBD1Q9H0C5 482 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 XPR1Q9UBH6 696 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 CPNE7Q9UBL6 633 aa6.69□□□□□ -1.34
CCDC58-204ENST00000479414 A0A0B4J269 797 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 TRIM43BA6NCK2 446 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 CYR61O00622 381 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 TBC1D4O60343 1298 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 ATXN1LP0C7T5 689 aaKnown RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 HKR1P10072 659 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 CYP2C9P11712 490 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 BRAFP15056 766 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 RPL17P18621 184 aaKnown RBP6.68□□□□□ -1.34
CCDC58-204ENST00000479414 KRT4P19013 534 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 ITGALP20701 1170 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 FMO1Q01740 532 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 SLC13A2Q13183 592 aa6.68□□□□□ -1.34
CCDC58-204ENST00000479414 CTBP1Q13363 440 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms