RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 CCL16O15467 120 aa21.93■■□□□ 1.1
VARS-224ENST00000479051 CCDC192P0DO97 292 aa21.93■■□□□ 1.1
VARS-224ENST00000479051 CT47A1Q5JQC4 288 aaPredicted RBP21.93■■□□□ 1.1
VARS-224ENST00000479051 INTS6LQ5JSJ4 861 aaKnown RBP21.93■■□□□ 1.1
VARS-224ENST00000479051 OR6B3Q8NGW1 331 aa21.93■■□□□ 1.1
VARS-224ENST00000479051 HSFX1Q9UBD0 423 aa21.93■■□□□ 1.1
VARS-224ENST00000479051 CDH22Q9UJ99 828 aa21.93■■□□□ 1.1
VARS-224ENST00000479051 N4BP1O75113 896 aaKnown RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 SEC24AO95486 1093 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 ASS1P00966 412 aaKnown RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 ERCC5P28715 1186 aaPredicted RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 GNL1P36915 607 aaPredicted RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 ALDH1A3P47895 512 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 DUSP4Q13115 394 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 DPCR1Q3MIW9 517 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 SASS6Q6UVJ0 657 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 RBM43Q6ZSC3 357 aaKnown RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 OSTM1Q86WC4 334 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 GJD3Q8N144 294 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 FBXL13Q8NEE6 735 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 SPPL2BQ8TCT7 592 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 TAS1R2Q8TE23 839 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 KBTBD7Q8WVZ9 684 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 RPGRIP1Q96KN7 1286 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 NECAB3Q96P71 396 aaPredicted RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 COL25A1Q9BXS0 654 aaPredicted RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 WDR6Q9NNW5 1121 aaKnown RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 CDH9Q9ULB4 789 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 PCDHB5Q9Y5E4 795 aa21.92■■□□□ 1.1
VARS-224ENST00000479051 SPTBN5Q9NRC6 3674 aaKnown RBP21.92■■□□□ 1.1
VARS-224ENST00000479051 CLUHO75153 1309 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 ACAT1P24752 427 aaKnown RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 TUFMP49411 452 aaKnown RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 NOP14P78316 857 aaKnown RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 CETN1Q12798 172 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 MAPRE1Q15691 268 aaKnown RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 WDR44Q5JSH3 913 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 IQCEQ6IPM2 695 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 OTOP3Q7RTS5 596 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 ATAD1Q8NBU5 361 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 SLC35C1Q96A29 364 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 ACSF2Q96CM8 615 aaPredicted RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 SYT15Q9BQS2 421 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 ABI2Q9NYB9 513 aaPredicted RBP21.91■■□□□ 1.1
VARS-224ENST00000479051 USTQ9Y2C2 406 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 YIPF1Q9Y548 306 aa21.91■■□□□ 1.1
VARS-224ENST00000479051 TRIM21P19474 475 aaKnown RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 EPHB3P54753 998 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 TWF1Q12792 350 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 MGAT5BQ3V5L5 792 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 SCARA5Q6ZMJ2 495 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 GRASPQ7Z6J2 395 aaPredicted RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 TDRD5Q8NAT2 981 aaKnown RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 ZNF512Q96ME7 567 aaPredicted RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 SEPT5Q99719 369 aaPredicted RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 MRPL45Q9BRJ2 306 aaKnown RBP21.9■■□□□ 1.1
VARS-224ENST00000479051 DNAI2Q9GZS0 605 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 SMYD3Q9H7B4 428 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 RAB20Q9NX57 234 aa21.9■■□□□ 1.1
VARS-224ENST00000479051 C2orf16Q68DN1 1984 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 C19orf67A6NJJ6 358 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 A8MXQ7 604 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 PDGFRBP09619 1106 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 PTPN2P17706 415 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 MARSP56192 900 aaKnown RBP21.89■■□□□ 1.09
VARS-224ENST00000479051 VEPH1Q14D04 833 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 C4orf50Q6ZRC1 276 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 LRRTM3Q86VH5 581 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 SPATA2LQ8IUW3 424 aaPredicted RBP21.89■■□□□ 1.09
VARS-224ENST00000479051 FAM114A1Q8IWE2 563 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 PLCD3Q8N3E9 789 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 FAXDC2Q96IV6 333 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 PI4K2AQ9BTU6 479 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 NIF3L1Q9GZT8 377 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 ABCB6Q9NP58 842 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 GTF3C4Q9UKN8 822 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 SLC27A5Q9Y2P5 690 aa21.89■■□□□ 1.09
VARS-224ENST00000479051 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.89■■□□□ 1.09
VARS-224ENST00000479051 LOC730098B7Z3J9 87 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 VNN2O95498 520 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 SP100P23497 879 aaPredicted RBP21.88■■□□□ 1.09
VARS-224ENST00000479051 FSHRP23945 695 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 LMO2P25791 158 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 FMO5P49326 533 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 CBWD6Q4V339 395 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 PABPC1LQ4VXU2 614 aaKnown RBP21.88■■□□□ 1.09
VARS-224ENST00000479051 CBWD3Q5JTY5 395 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 CBWD5Q5RIA9 395 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 SPOPLQ6IQ16 392 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 CREBRFQ8IUR6 639 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 LEMD2Q8NC56 503 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 FEZF2Q8TBJ5 459 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 TNIP3Q96KP6 325 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 CYP3A43Q9HB55 503 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 ANO10Q9NW15 660 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 ASB3Q9Y575 518 aa21.88■■□□□ 1.09
VARS-224ENST00000479051 A0A0C4DFX4 3053 aa21.87■■□□□ 1.09
VARS-224ENST00000479051 PMM2O15305 246 aa21.87■■□□□ 1.09
VARS-224ENST00000479051 CDH8P55286 799 aa21.87■■□□□ 1.09
VARS-224ENST00000479051 PSMC1P62191 440 aaKnown RBP21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms