RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 PLK4O00444 970 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 ATF6P18850 670 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 GNA11P29992 359 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 MCM4P33991 863 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 HOXD12P35452 270 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 OPRD1P41143 372 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 FAM187BQ17R55 369 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 GAB4Q2WGN9 574 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 CENPPQ6IPU0 288 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 SYNE3Q6ZMZ3 975 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 ALLCQ8N6M5 410 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 HMGB4Q8WW32 186 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 PRIMPOLQ96LW4 560 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 KIAA1522Q9P206 1035 aaPredicted RBP13.4□□□□□ -0.26
HDAC8-217ENST00000478743 DDX25Q9UHL0 483 aaKnown RBP13.4□□□□□ -0.26
HDAC8-217ENST00000478743 STK24Q9Y6E0 443 aa13.4□□□□□ -0.26
HDAC8-217ENST00000478743 NBPF19A0A087WUL8 3843 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 CAPN9O14815 690 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 USO1O60763 962 aaKnown RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 NUCB1Q02818 461 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 RPL6Q02878 288 aaKnown RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 ZNF33AQ06730 810 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 GRIK2Q13002 908 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 SLC14A1Q13336 389 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 PRPF4BQ13523 1007 aaKnown RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 TMEM132AQ24JP5 1023 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 MAB21L3Q8N8X9 362 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 TXNDC5Q8NBS9 432 aaKnown RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 CEP76Q8TAP6 659 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 WHAMMQ8TF30 809 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 KIFC3Q9BVG8 833 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 SLKQ9H2G2 1235 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 PRDM16Q9HAZ2 1276 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 KCNMB3Q9NPA1 279 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 CD93Q9NPY3 652 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 MAFFQ9ULX9 164 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 NUB1Q9Y5A7 615 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 DOPEY2Q9Y3R5 2298 aa13.39□□□□□ -0.27
HDAC8-217ENST00000478743 UBR5O95071 2799 aaPredicted RBP13.39□□□□□ -0.27
HDAC8-217ENST00000478743 TMEM131Q92545 1883 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 LARGE1O95461 756 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-217ENST00000478743 ALDH1A3P47895 512 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 OSTNP61366 133 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 LY6DQ14210 128 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 EPHA7Q15375 998 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 XKR4Q5GH76 650 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 COLEC12Q5KU26 742 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 EMC10Q5UCC4 262 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 ALKAL1Q6UXT8 129 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 OTUD6AQ7L8S5 288 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 GPR155Q7Z3F1 870 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 POTEDQ86YR6 584 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 CPA6Q8N4T0 437 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 IL17RCQ8NAC3 791 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 TTC16Q8NEE8 873 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
HDAC8-217ENST00000478743 CCDC12Q8WUD4 166 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-217ENST00000478743 HAS1Q92839 578 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 TRIM4Q9C037 500 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 BCCIPQ9P287 314 aaKnown RBP eCLIP13.38□□□□□ -0.27
HDAC8-217ENST00000478743 PCDHB8Q9UN66 801 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 BTBD3Q9Y2F9 522 aa13.38□□□□□ -0.27
HDAC8-217ENST00000478743 TEX51A0A1B0GUA7 166 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 TCRBV21S2A2A0A5A6 115 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 M0R2N6 131 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 DKC1O60832 514 aaKnown RBP eCLIP13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ADAM23O75077 832 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 DGAT1O75907 488 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 IGHDP01880 384 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 RARRES1P49788 294 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 BFSP1Q12934 665 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 MYO1EQ12965 1108 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 MTF1Q14872 753 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 NPY5RQ15761 445 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 EML3Q32P44 896 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 PLEKHG6Q3KR16 790 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 TXNDC8Q6A555 127 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 TPH2Q8IWU9 490 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 PDCD7Q8N8D1 485 aaKnown RBP13.37□□□□□ -0.27
HDAC8-217ENST00000478743 BICD2Q8TD16 824 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 GIPC2Q8TF65 315 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 HSPA12BQ96MM6 686 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ACAP3Q96P50 834 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ARID3AQ99856 593 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ADPGKQ9BRR6 497 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 LSG1Q9H089 658 aaKnown RBP13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ZSWIM4Q9H7M6 989 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 TDP1Q9NUW8 608 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 TUBGCP4Q9UGJ1 667 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 ANAPC1Q9H1A4 1944 aa13.37□□□□□ -0.27
HDAC8-217ENST00000478743 B8ZZF3 427 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 PRPF3O43395 683 aaKnown RBP13.36□□□□□ -0.27
HDAC8-217ENST00000478743 MARCH6O60337 910 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 TADA3O75528 432 aa13.36□□□□□ -0.27
HDAC8-217ENST00000478743 SLITRK3O94933 977 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms