RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ABCB6Q9NP58 842 aa15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 ABI2Q9NYB9 513 aaPredicted RBP15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 UXTQ9UBK9 157 aaPredicted RBP15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 MTMR6Q9Y217 621 aa15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 GVINP1Q7Z2Y8 2422 aa15.56■□□□□ 0.08
SMARCE1-209ENST00000478349 PDCD11Q14690 1871 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 FRMD3A2A2Y4 597 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 SOBPA7XYQ1 873 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 ITGB3P05106 788 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 HSP90AA1P07900 732 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 CSH1P0DML2 217 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 CSH2P0DML3 217 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 HAPLN1P10915 354 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 SDHBP21912 280 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 PCSK1P29120 753 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 AVPR1AP37288 418 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 RPL10AP62906 217 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 RBP5P82980 135 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 MTAPQ13126 283 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 DGKKQ5KSL6 1271 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 CRELD2Q6UXH1 353 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 GAREM2Q75VX8 874 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 CELF5Q8N6W0 485 aaKnown RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 ZBTB44Q8NCP5 570 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 BPIFB1Q8TDL5 484 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 LEO1Q8WVC0 666 aaPredicted RBP15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 SAAL1Q96ER3 474 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 TMEM209Q96SK2 561 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 KIF9Q9HAQ2 790 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 MAGEF1Q9HAY2 307 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 AGAP1Q9UPQ3 857 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 TRIP11Q15643 1979 aa15.55■□□□□ 0.08
SMARCE1-209ENST00000478349 USP34Q70CQ2 3546 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 SPTLC2O15270 562 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 PPP6R2O75170 966 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 TNNC2P02585 160 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 KRT19P08727 400 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 CCNE1P24864 410 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 LHX1P48742 406 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 AMPD2Q01433 879 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 BFSP1Q12934 665 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 KIAA2013Q8IYS2 634 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 GPD1LQ8N335 351 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 TMEM130Q8N3G9 435 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 CSGALNACT2Q8N6G5 542 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 TTC9BQ8N6N2 239 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 TOP6BLQ8N6T0 577 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 PDILTQ8N807 584 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 IQUBQ8NA54 791 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 MRPS31Q92665 395 aaKnown RBP15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 LPIN3Q9BQK8 851 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 ACBD6Q9BR61 282 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 EPC1Q9H2F5 836 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 LMAN1LQ9HAT1 526 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 GMEB2Q9UKD1 530 aa15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 SMG5Q9UPR3 1016 aaKnown RBP15.54■□□□□ 0.08
SMARCE1-209ENST00000478349 ZNF233A6NK53 670 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 ARNTLO00327 626 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 EIF3DO15371 548 aaKnown RBP eCLIP15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 PRPF40AO75400 957 aaKnown RBP15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 SOAT2O75908 522 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 YEATS4O95619 227 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 ATF6P18850 670 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 KCNA1Q09470 495 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 MAPRE1Q15691 268 aaKnown RBP15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 SYNPOQ8N3V7 929 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 PDCL2Q8N4E4 241 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 SPEM1Q8N4L4 309 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 C1orf127Q8N9H9 656 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 LINC00301Q8NCQ3 95 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 NELL1Q92832 810 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 GDAP2Q9NXN4 497 aa15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 DDX43Q9NXZ2 648 aaKnown RBP15.53■□□□□ 0.08
SMARCE1-209ENST00000478349 UBE4BO95155 1302 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 NOTCH4Q99466 2003 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SPECC1L-ADORA2AF8WAN1 911 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 LILRB5O75023 590 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CXCL12P48061 93 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CASP5P51878 434 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SNRPFP62306 86 aaKnown RBP15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 ASIC1P78348 528 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CYP4F8P98187 520 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 ITPRIPL2Q3MIP1 535 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 INTS6LQ5JSJ4 861 aaKnown RBP15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 STXBP5Q5T5C0 1151 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CC2D1AQ6P1N0 951 aaPredicted RBP15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 C4orf50Q6ZRC1 276 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 DPH6Q7L8W6 267 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SPATA2LQ8IUW3 424 aaPredicted RBP15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 ADGRF2Q8IZF7 708 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CMTM8Q8IZV2 173 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 SUMF1Q8NBK3 374 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 GIPC2Q8TF65 315 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 FUBP3Q96I24 572 aaKnown RBP eCLIP15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
SMARCE1-209ENST00000478349 PANK2Q9BZ23 570 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms