RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ARFGEF1Q9Y6D6 1849 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 CCDC154A6NI56 674 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 POMCP01189 267 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 NCLP19338 710 aaKnown RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 ZFP36P26651 326 aaKnown RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 CHRNA5P30532 468 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 RECQLP46063 649 aaPredicted RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 ADKP55263 362 aaKnown RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 SOX10P56693 466 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 CDC42EP1Q00587 391 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 TARDBPQ13148 414 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS50-214ENST00000477935 UAP1L1Q3KQV9 507 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 C3orf36Q3SXR2 165 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 PDCD4Q53EL6 469 aaKnown RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 ZNF529Q6P280 563 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 PIGBQ92521 554 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 HAS1Q92839 578 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 CHMP4CQ96CF2 233 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 LTV1Q96GA3 475 aaPredicted RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 TEX101Q9BY14 249 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 PCED1AQ9H1Q7 454 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 TDP1Q9NUW8 608 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 TYW1Q9NV66 732 aaKnown RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 FAM30AQ9NZY2 134 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 FZD1Q9UP38 647 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 USP15Q9Y4E8 981 aaPredicted RBP5.93□□□□□ -1.46
VPS50-214ENST00000477935 C5P01031 1676 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 A0A0C4DFX4 3053 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 C4BP0C0L5 1744 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 EVC2Q86UK5 1308 aa5.93□□□□□ -1.46
VPS50-214ENST00000477935 NCR1O76036 304 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 DDNO94850 711 aaPredicted RBP5.92□□□□□ -1.46
VPS50-214ENST00000477935 SNUPNO95149 360 aaKnown RBP5.92□□□□□ -1.46
VPS50-214ENST00000477935 SLPIP03973 132 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 ADH4P08319 380 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 NEK2P51955 445 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 CTXN1P60606 82 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 KLF10Q13118 480 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 ITPK1Q13572 414 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 IL10RAQ13651 578 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 UBXN2BQ14CS0 331 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 AGAP9Q5VTM2 703 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 LRRC55Q6ZSA7 311 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 MED25Q71SY5 747 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 RHOUQ7L0Q8 258 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 UBE3BQ7Z3V4 1068 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 MRGPREQ86SM8 312 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 RSPH3Q86UC2 560 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 ZBTB46Q86UZ6 589 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 PLXDC1Q8IUK5 500 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 RHOT2Q8IXI1 618 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 SYNE4Q8N205 404 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 DCBLD1Q8N8Z6 715 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 STAG1Q8WVM7 1258 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 LENG9Q96B70 501 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 TMX3Q96JJ7 454 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 FBXO34Q9NWN3 711 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 N4BP2Q86UW6 1770 aaPredicted RBP5.92□□□□□ -1.46
VPS50-214ENST00000477935 RGPD5Q99666 1765 aa5.92□□□□□ -1.46
VPS50-214ENST00000477935 KTN1Q86UP2 1357 aaKnown RBP5.92□□□□□ -1.46
VPS50-214ENST00000477935 SMG6Q86US8 1419 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 CD163L1Q9NR16 1453 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 VIRMAQ69YN4 1812 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 GAGE12BA1L429 117 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 GAGE12HA6NDE8 117 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 H0YIN7 160 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 RNASET2O00584 256 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 SGTAO43765 313 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 ITGB1P05556 798 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SPATA31D3P0C874 917 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 LAG3P18627 525 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 TMEM240Q5SV17 173 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 DACT2Q5SW24 774 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 PPP4R3AQ6IN85 833 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SPATA31D4Q6ZUB0 917 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS50-214ENST00000477935 CMTR2Q8IYT2 770 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 MIER2Q8N344 545 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SLC17A8Q8NDX2 589 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 NEU4Q8WWR8 484 aaPredicted RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 KAT5Q92993 513 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SORCS2Q96PQ0 1159 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 C11orf54Q9H0W9 315 aaPredicted RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 AKIP1Q9NQ31 210 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 DDX21Q9NR30 783 aaKnown RBP eCLIP5.91□□□□□ -1.46
VPS50-214ENST00000477935 DDX56Q9NY93 547 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 TMOD3Q9NYL9 352 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 HACL1Q9UJ83 578 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 ING1Q9UK53 422 aaPredicted RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 LUC7L2Q9Y383 392 aaKnown RBP5.91□□□□□ -1.46
VPS50-214ENST00000477935 PCDHB1Q9Y5F3 818 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 SBF1O95248 1867 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 KIAA1551Q9HCM1 1747 aa5.91□□□□□ -1.46
VPS50-214ENST00000477935 TCRBV7S2A1N4TA0A589 114 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 PPFIA4O75335 1185 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 PRSS23O95084 383 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 PDGFRBP09619 1106 aa5.9□□□□□ -1.46
VPS50-214ENST00000477935 SLC6A2P23975 617 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms