RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 FAM49BQ9NUQ9 324 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 CYP39A1Q9NYL5 469 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 BFARQ9NZS9 450 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 ZC3H7BQ9UGR2 993 aaKnown RBP15.35■□□□□ 0.05
HDAC6-220ENST00000477528 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-220ENST00000477528 TXNDC9O14530 226 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 PPP1R12AO14974 1030 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-220ENST00000477528 CYP1A2P05177 515 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 ZNF200P98182 395 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-220ENST00000477528 NME3Q13232 169 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 TTMPQ5BVD1 217 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 NUDCD3Q8IVD9 361 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 FBXO16Q8IX29 292 aaPredicted RBP15.35■□□□□ 0.05
HDAC6-220ENST00000477528 ELMO3Q96BJ8 720 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 DPP3Q9NY33 737 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 CHMP2BQ9UQN3 213 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 NUP98P52948 1817 aa15.35■□□□□ 0.05
HDAC6-220ENST00000477528 RRN3P2A6NIE6 340 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 RIPK2O43353 540 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 TTC4O95801 387 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 SPON1Q9HCB6 807 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 USH1CQ9Y6N9 552 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 GOLGA8RI6L899 631 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 PFDN6O15212 129 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 MX2P20592 715 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 CNTN2Q02246 1040 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 DCAF4L1Q3SXM0 396 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 CATSPERGQ6ZRH7 1159 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 FAM71DQ8N9W8 422 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 MYCBPQ99417 103 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 ADAM33Q9BZ11 813 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 FRMD8Q9BZ67 464 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 SLC13A1Q9BZW2 595 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 GPC4O75487 556 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 LMNAP02545 664 aaKnown RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 ACADSBP45954 432 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 CTCFP49711 727 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 RTP1P59025 263 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 RPS6KA2Q15349 733 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 ITPRIPL1Q6GPH6 555 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 IKZF4Q9H2S9 585 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 GGT7Q9UJ14 662 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 BAZ2AQ9UIF9 1905 aaKnown RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 MORF4L2Q15014 288 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 DGKDQ16760 1214 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 ZBTB45Q96K62 511 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-220ENST00000477528 CYP3A43Q9HB55 503 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 USP20Q9Y2K6 914 aa15.34■□□□□ 0.05
HDAC6-220ENST00000477528 ZWINTO95229 277 aa15.33■□□□□ 0.05
HDAC6-220ENST00000477528 SULT1E1P49888 294 aa15.33■□□□□ 0.05
HDAC6-220ENST00000477528 GEMIN4P57678 1058 aaKnown RBP15.33■□□□□ 0.05
HDAC6-220ENST00000477528 UGCGQ16739 394 aa15.33■□□□□ 0.05
HDAC6-220ENST00000477528 TAF1BQ53T94 588 aaPredicted RBP15.33■□□□□ 0.05
HDAC6-220ENST00000477528 CNPY4Q8N129 248 aa15.33■□□□□ 0.05
HDAC6-220ENST00000477528 TMEM134Q9H6X4 195 aa15.33■□□□□ 0.05
HDAC6-220ENST00000477528 SPECC1L-ADORA2AF8WAN1 911 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 PDGFRBP09619 1106 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 TAF11Q15544 211 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 LY6KQ17RY6 165 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 C4orf22Q6V702 233 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 SPATA24Q86W54 205 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 PARK7Q99497 189 aaKnown RBP15.33■□□□□ 0.04
HDAC6-220ENST00000477528 VPS11Q9H270 941 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 SALL4Q9UJQ4 1053 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 GSTA1P08263 222 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 GSTA2P09210 222 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 CETPP11597 493 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 ATICP31939 592 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 SERPINB6P35237 376 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 FMO1Q01740 532 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 TMEM62Q0P6H9 643 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 NOTUMQ6P988 496 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 ACP6Q9NPH0 428 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 DONSONQ9NYP3 566 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 PRDM4Q9UKN5 801 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 APOBEC2Q9Y235 224 aaKnown RBP15.33■□□□□ 0.04
HDAC6-220ENST00000477528 NPTXRO95502 500 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 HSPA4LO95757 839 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 CYP2C9P11712 490 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 TSPY1Q01534 308 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 SEPT6Q14141 434 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 SYCP2LQ5T4T6 812 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 ANO5Q75V66 913 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 PGM2Q96G03 612 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 PCYOX1Q9UHG3 505 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 COL18A1P39060 1754 aa15.33■□□□□ 0.04
HDAC6-220ENST00000477528 ATRNL1Q5VV63 1379 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 F5H423 210 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 OTUD4Q01804 1114 aaKnown RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 PTK7Q13308 1070 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 PID1Q7Z2X4 250 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 UBN1Q9NPG3 1134 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 NCF2P19878 526 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 JAM2P57087 298 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 PTPN11Q06124 597 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ACTN3Q08043 901 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-220ENST00000477528 ITIH4Q14624 930 aa15.32■□□□□ 0.04
HDAC6-220ENST00000477528 KCNT1Q5JUK3 1230 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms