RNA–Protein interactions for RNA: ENST00000476104.1

SLC48A1-204, Transcript of solute carrier family 48 member 1, humanhuman

TSL 4

Gene SLC48A1, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-204ENST00000476104 ASIC1P78348 528 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 RBP5P82980 135 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 SURF1Q15526 300 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 NFE2Q16621 373 aaPredicted RBP15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 GPD1LQ8N335 351 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 LRRC52Q8N7C0 313 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 C1orf127Q8N9H9 656 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 ZSWIM2Q8NEG5 633 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 GIPC2Q8TF65 315 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 ATRIPQ8WXE1 791 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 FAM3CQ92520 227 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 SNX21Q969T3 373 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 DHX58Q96C10 678 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 BORCS6Q96GS4 357 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 HINFPQ9BQA5 517 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 LPIN3Q9BQK8 851 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 FGFBP2Q9BYJ0 223 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 PDE11AQ9HCR9 933 aa15.27■□□□□ 0.04
SLC48A1-204ENST00000476104 COL4A3Q01955 1670 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 ZNF233A6NK53 670 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 CHADO15335 359 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 HAPLN1P10915 354 aaPredicted RBP15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 ATF6P18850 670 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 KPNA1P52294 538 aaPredicted RBP15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 WNT7BP56706 349 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 MYL7Q01449 175 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 MYO1EQ12965 1108 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 STXBP5Q5T5C0 1151 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 C1orf228Q6PIY5 440 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 LRRTM3Q86VH5 581 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 GPIHBP1Q8IV16 184 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 MAML2Q8IZL2 1156 aaPredicted RBP15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 TMEM86AQ8N2M4 240 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 PDCL2Q8N4E4 241 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 ANKRD36BP1Q96IX9 119 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 TRIM9Q9C026 710 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 TASP1Q9H6P5 420 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 KBTBD4Q9NVX7 518 aa15.26■□□□□ 0.03
SLC48A1-204ENST00000476104 TSC2P49815 1807 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 PRPF40AO75400 957 aaKnown RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 TNNC2P02585 160 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 CCNE1P24864 410 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 CYP4F8P98187 520 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 FCHO2Q0JRZ9 810 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 PPP2R5DQ14738 602 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 E2F4Q16254 413 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 FOXD4L6Q3SYB3 417 aaPredicted RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 ARHGAP29Q52LW3 1261 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 FOXD4L3Q6VB84 417 aaPredicted RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 RSPRY1Q96DX4 576 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 MSANTD3Q96H12 275 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 ACBD6Q9BR61 282 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 MTMR12Q9C0I1 747 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 C8orf33Q9H7E9 229 aaPredicted RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 MAGEF1Q9HAY2 307 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 KIAA1586Q9HCI6 787 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 THG1LQ9NWX6 298 aaKnown RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 DDX43Q9NXZ2 648 aaKnown RBP15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 OBP2AQ9NY56 170 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 ZMYM5Q9UJ78 669 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 L1RE1Q9UN81 338 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 PCDHGA2Q9Y5H1 932 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 SNX9Q9Y5X1 595 aa15.25■□□□□ 0.03
SLC48A1-204ENST00000476104 EIF3DO15371 548 aaKnown RBP eCLIP15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 ZSCAN22P10073 491 aaPredicted RBP15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 PCSK1P29120 753 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 ME1P48163 572 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 MLLT6P55198 1093 aaPredicted RBP15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 RPL10AP62906 217 aaKnown RBP15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 MTAPQ13126 283 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 FAM26FQ5R3K3 315 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 TOP6BLQ8N6T0 577 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 SPATA18Q8TC71 538 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 HPS3Q969F9 1004 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 IER2Q9BTL4 223 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 PI4K2AQ9BTU6 479 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 MKNK1Q9BUB5 465 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 CHRDQ9H2X0 955 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 LMAN1LQ9HAT1 526 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 INTS13Q9NVM9 706 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 ZSCAN32Q9NX65 697 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 GDAP2Q9NXN4 497 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 FAM13BQ9NYF5 915 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 OTOGLQ3ZCN5 2332 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 CFAP54Q96N23 3096 aa15.24■□□□□ 0.03
SLC48A1-204ENST00000476104 TICRRQ7Z2Z1 1910 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 WDR87Q6ZQQ6 2873 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 NCANO14594 1321 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 VPS13AQ96RL7 3174 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 FANCMQ8IYD8 2048 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 GPR179Q6PRD1 2367 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 SHISA7A6NL88 538 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 SLC38A8A6NNN8 435 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 CSH1P0DML2 217 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 CSH2P0DML3 217 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 WEE1P30291 646 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 AVPR1AP37288 418 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 LHX1P48742 406 aa15.23■□□□□ 0.03
SLC48A1-204ENST00000476104 PLCB2Q00722 1185 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms