RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 PLK5Q496M5 336 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 DAB2IPQ5VWQ8 1189 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 FSTL4Q6MZW2 842 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 C11orf74Q86VG3 221 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 TTC9BQ8N6N2 239 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 SYT2Q8N9I0 419 aaPredicted RBP13.64□□□□□ -0.23
SKA3-206ENST00000475251 KCNN1Q92952 543 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 ACDQ96AP0 544 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 CDK5RAP3Q96JB5 506 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 LPIN3Q9BQK8 851 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 SLC46A2Q9BY10 475 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 ZCWPW1Q9H0M4 648 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 IL21Q9HBE4 155 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 DERAQ9Y315 318 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 CHD8Q9HCK8 2581 aa13.64□□□□□ -0.23
SKA3-206ENST00000475251 MYH11P35749 1972 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
SKA3-206ENST00000475251 PP2D1A8MPX8 630 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 RNF40O75150 1001 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 ADRB2P07550 413 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 ATF6P18850 670 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 TNFSF9P41273 254 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 RAD51AP2Q09MP3 1159 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 ST3GAL1Q11201 340 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 NBR1Q14596 966 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 PDGFRLQ15198 375 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 ZRSR1Q15695 479 aaKnown RBP13.63□□□□□ -0.23
SKA3-206ENST00000475251 ENOX2Q16206 610 aaKnown RBP13.63□□□□□ -0.23
SKA3-206ENST00000475251 PSAPL1Q6NUJ1 521 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 PKN3Q6P5Z2 889 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 SYT13Q7L8C5 426 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 OR10T2Q8NGX3 314 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 EDEM2Q9BV94 578 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 EBF3Q9H4W6 596 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 TDP1Q9NUW8 608 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 LIMCH1Q9UPQ0 1083 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 USP24Q9UPU5 2620 aa13.63□□□□□ -0.23
SKA3-206ENST00000475251 CFAP47Q6ZTR5 3102 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 APBB3O95704 486 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
SKA3-206ENST00000475251 CDC25AP30304 524 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 NOVA1P51513 510 aaKnown RBP13.62□□□□□ -0.23
SKA3-206ENST00000475251 GUCY2FP51841 1108 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 CREB5Q02930 508 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 TMEM132DQ14C87 1099 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 HYIQ5T013 277 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 C9orf57Q5W0N0 161 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 UNQ6494/PRO21346Q6UXR6 183 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 CCDC83Q8IWF9 413 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 DCP1BQ8IZD4 617 aaKnown RBP13.62□□□□□ -0.23
SKA3-206ENST00000475251 CPA6Q8N4T0 437 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 MAB21L3Q8N8X9 362 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 MRPS31Q92665 395 aaKnown RBP13.62□□□□□ -0.23
SKA3-206ENST00000475251 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 P2RY13Q9BPV8 354 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 MMTAG2Q9BU76 263 aaKnown RBP13.62□□□□□ -0.23
SKA3-206ENST00000475251 MSTO1Q9BUK6 570 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 SMG9Q9H0W8 520 aaKnown RBP13.62□□□□□ -0.23
SKA3-206ENST00000475251 HPS4Q9NQG7 708 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 EBF1Q9UH73 591 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 PCDHB6Q9Y5E3 794 aa13.62□□□□□ -0.23
SKA3-206ENST00000475251 TMEM8BA6NDV4 472 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 PIRO00625 290 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 CAVIN2O95810 425 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 EGFP01133 1207 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 PIGRP01833 764 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 CSH1P0DML2 217 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 CSH2P0DML3 217 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 HAPLN1P10915 354 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 HOXC13P31276 330 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 TAF6P49848 677 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 NLRP12P59046 1061 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 ZNF268Q14587 947 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 JADE1Q6IE81 842 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 RPLP0P6Q8NHW5 317 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 GIPC2Q8TF65 315 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 USP13Q92995 863 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 HHIPQ96QV1 700 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 DUSP15Q9H1R2 295 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 ASB7Q9H672 318 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 SH2B1Q9NRF2 756 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 ABI2Q9NYB9 513 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 UXTQ9UBK9 157 aaPredicted RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 CPSF3Q9UKF6 684 aaKnown RBP13.61□□□□□ -0.23
SKA3-206ENST00000475251 TBX20Q9UMR3 447 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 C2CD2Q9Y426 696 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 PCDHB5Q9Y5E4 795 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 TSC2P49815 1807 aa13.61□□□□□ -0.23
SKA3-206ENST00000475251 A0A0B4J269 797 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 ANO9A1A5B4 782 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
SKA3-206ENST00000475251 C4orf47A7E2U8 309 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 K7ENM7 598 aa13.6□□□□□ -0.23
SKA3-206ENST00000475251 CYB561D2O14569 222 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms