RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 CDH8P55286 799 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 GCNT1Q02742 428 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 TBX2Q13207 712 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 ORC1Q13415 861 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 TRIM14Q14142 442 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 DRAP1Q14919 205 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SOWAHAQ2M3V2 549 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 TUSC1Q2TAM9 212 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 WSCD1Q658N2 575 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 PDXDC1Q6P996 788 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 OSTM1Q86WC4 334 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 ADGRF2Q8IZF7 708 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SLC39A11Q8N1S5 342 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 PDCL2Q8N4E4 241 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 APPL2Q8NEU8 664 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 BAP1Q92560 729 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 TMEM169Q96HH4 297 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 IGSF21Q96ID5 467 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SUSD3Q96L08 255 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 B3GALT6Q96L58 329 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SPAG5Q96R06 1193 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 MRPL45Q9BRJ2 306 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 C17orf80Q9BSJ5 609 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 NUP58Q9BVL2 599 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 VN1R3Q9BXE9 311 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 NAA15Q9BXJ9 866 aaKnown RBP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 GPR62Q9BZJ7 368 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 NKX2-4Q9H2Z4 354 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 AAASQ9NRG9 546 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 GDAP2Q9NXN4 497 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SPG21Q9NZD8 308 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 HMGXB4Q9UGU5 601 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 PCDHB4Q9Y5E5 795 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 PCDHB12Q9Y5F1 795 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 PCDHA11Q9Y5I1 949 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 TIMM13Q9Y5L4 95 aaPredicted RBP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 SF3B1O75533 1304 aaKnown RBP eCLIP8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 MYO7AQ13402 2215 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 C2orf16Q68DN1 1984 aa8.97□□□□□ -0.97
GAPVD1-213ENST00000469498 ANAPC1Q9H1A4 1944 aa8.96□□□□□ -0.97
GAPVD1-213ENST00000469498 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 A0A1W2PQJ5 194 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 GOLGA6L6A8MZA4 724 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 F8VZ95 297 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 M0QZQ0 153 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 MFAP3LO75121 409 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 GFPT2O94808 682 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 CALCAP01258 141 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 PPM1AP35813 382 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 ADKP55263 362 aaKnown RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 JAM2P57087 298 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 YWHAEP62258 255 aaKnown RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 ARID5AQ03989 594 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 RAB30Q15771 203 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 ZNF394Q53GI3 561 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 FIGNQ5HY92 759 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 FAM171A1Q5VUB5 890 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 E4F1Q66K89 784 aaPredicted RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 TMEM270Q6UE05 265 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 CEP57Q86XR8 500 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 TOP6BLQ8N6T0 577 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 UBR7Q8N806 425 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 RBBP8NLQ8NC74 664 aaPredicted RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 KBTBD7Q8WVZ9 684 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 SHC3Q92529 594 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 CLP1Q92989 425 aaKnown RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 PBX4Q9BYU1 374 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 GPR88Q9GZN0 384 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 SNX25Q9H3E2 840 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 CISHQ9NSE2 258 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 FBXL5Q9UKA1 691 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 SLC27A5Q9Y2P5 690 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 LUC7L2Q9Y383 392 aaKnown RBP8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 DAAM1Q9Y4D1 1078 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 NME7Q9Y5B8 376 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 DOCK6Q96HP0 2047 aa8.96□□□□□ -0.98
GAPVD1-213ENST00000469498 FOXN3O00409 490 aaPredicted RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 TRAPPC3O43617 180 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 CILPO75339 1184 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 FGF18O76093 207 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 PTMAP06454 111 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ACO1P21399 889 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 WARSP23381 471 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ACAT1P24752 427 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 KRT9P35527 623 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 SOX5P35711 763 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 STAT1P42224 750 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 CDR1P51861 262 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 NDST1P52848 882 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 PSMC1P62191 440 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ZBED6P86452 979 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 TAP1Q03518 808 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 INCA1Q0VD86 236 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ELAVL2Q12926 359 aaKnown RBP8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ARID5BQ14865 1188 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 ASIC2Q16515 512 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 CCDC142Q17RM4 750 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 RTP2Q5QGT7 225 aa8.95□□□□□ -0.98
GAPVD1-213ENST00000469498 SFMBT2Q5VUG0 894 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms