RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 ESYT3A0FGR9 886 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 BLACEA4D250 179 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 E9PMD0 336 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ARNTLO00327 626 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 FOXN1O15353 648 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MAFGO15525 162 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MED24O75448 989 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 STAM2O75886 525 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SLITRK3O94933 977 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ARIH2O95376 493 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 GGPS1O95749 300 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 GLI1P08151 1106 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 C6orf222P0C671 652 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 KCNA2P16389 499 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 PRKCAP17252 672 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 UBA1P22314 1058 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 EDNRBP24530 442 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 CASP1P29466 404 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ARL4AP40617 200 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 STAT6P42226 847 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 RPL11P62913 178 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 CAP1Q01518 475 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 TNFAIP2Q03169 654 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 NEDD9Q14511 834 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ARHGEF6Q15052 776 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 EPHA7Q15375 998 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 KCNMB1Q16558 191 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 KLHL40Q2TBA0 621 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 GJC2Q5T442 439 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 CCDC183Q5T5S1 534 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MFSD14CQ5VZR4 134 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SWSAP1Q6NVH7 229 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 TAPT1Q6NXT6 567 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 KRBA2Q6ZNG9 492 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 NIPA1Q7RTP0 329 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 CATSPER3Q86XQ3 398 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 GRAMD1CQ8IYS0 662 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SYNPOQ8N3V7 929 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 IGSF22Q8N9C0 903 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 IQUBQ8NA54 791 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ENGASEQ8NFI3 743 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 RAET1EQ8TD07 263 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 PIGOQ8TEQ8 1089 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 PTPRN2Q92932 1015 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SYAP1Q96A49 352 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ERO1AQ96HE7 468 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 AK8Q96MA6 479 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SPATA33Q96N06 139 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 INPP4AQ96PE3 977 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 RIT2Q99578 217 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MMTAG2Q9BU76 263 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 MRPL4Q9BYD3 311 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 NUP62CLQ9H1M0 184 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 BLZF1Q9H2G9 400 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 TNMDQ9H2S6 317 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 POLD4Q9HCU8 107 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 DDX19AQ9NUU7 478 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 GABBR1Q9UBS5 961 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 SLC9A2Q9UBY0 812 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 YBX2Q9Y2T7 364 aaKnown RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 TRIM17Q9Y577 477 aa4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 TIMM13Q9Y5L4 95 aaPredicted RBP4.53□□□□□ -1.68
TMEM39A-204ENST00000468545 ZNFX1Q9P2E3 1918 aaKnown RBP4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 GSTTP1A0A1W2PQM5 241 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 SYCE3A1L190 88 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 CCNE2O96020 404 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 GH1P01241 217 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 KRT18P05783 430 aaKnown RBP4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MSL3P1P0C860 447 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PLA2G4BP0C869 781 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 TGFB3P10600 412 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 LCP1P13796 627 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PNLIPP16233 465 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MARK3P27448 753 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 ICAM3P32942 547 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 JAK3P52333 1124 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 ACTR2P61160 394 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PSMC6P62333 389 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 GABREP78334 506 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 CYP4F8P98187 520 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MVKQ03426 396 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PPP2R5CQ13362 524 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PNOCQ13519 176 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 TRIM61Q5EBN2 209 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 CELF3Q5SZQ8 465 aaKnown RBP4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 HAUS3Q68CZ6 603 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 IQSEC1Q6DN90 963 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MIS18BP1Q6P0N0 1132 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 KCNV1Q6PIU1 500 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 SASS6Q6UVJ0 657 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MAMDC4Q6UXC1 1216 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MAEAQ7L5Y9 396 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 Q8N1Y9 231 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 DNAJC5GQ8N7S2 189 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 GIMAP8Q8ND71 665 aaPredicted RBP4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 RCBTB1Q8NDN9 531 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 OR6J1Q8NGC5 347 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 MORC4Q8TE76 937 aa4.52□□□□□ -1.69
TMEM39A-204ENST00000468545 SCFD2Q8WU76 684 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms