RNA–Protein interactions for RNA: ENST00000468105.5

RPP40-204, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 2

Gene RPP40, Length 632 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-204ENST00000468105 ATXN3LQ9H3M9 355 aa14.74□□□□□ -0.05
RPP40-204ENST00000468105 TMEM134Q9H6X4 195 aa14.74□□□□□ -0.05
RPP40-204ENST00000468105 TOPORSQ9NS56 1045 aaPredicted RBP14.74□□□□□ -0.05
RPP40-204ENST00000468105 GKN1Q9NS71 199 aa14.74□□□□□ -0.05
RPP40-204ENST00000468105 CLIC4Q9Y696 253 aa14.74□□□□□ -0.05
RPP40-204ENST00000468105 SMG1Q96Q15 3661 aaKnown RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 C4orf47A7E2U8 309 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 GOLGA6L22H0YM25 854 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 LAD1O00515 517 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 SLC16A4O15374 487 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 PPP6R2O75170 966 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 OR52Z1P0C646 297 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 ARSAP15289 507 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 CDC25AP30304 524 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 LRPAP1P30533 357 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 ATP2C1P98194 919 aaPredicted RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 YWHAHQ04917 246 aaPredicted RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 STK38Q15208 465 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 ARHGAP29Q52LW3 1261 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 KDF1Q8NAX2 398 aaPredicted RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 APPL2Q8NEU8 664 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 BPIFB1Q8TDL5 484 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 LEO1Q8WVC0 666 aaPredicted RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 E2F7Q96AV8 911 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 SPATA32Q96LK8 384 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 MRPL4Q9BYD3 311 aaKnown RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 DDX19AQ9NUU7 478 aaKnown RBP14.73□□□□□ -0.05
RPP40-204ENST00000468105 MAFFQ9ULX9 164 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 INVSQ9Y283 1065 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 FREM2Q5SZK8 3169 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 KIAA1549LQ6ZVL6 1849 aa14.73□□□□□ -0.05
RPP40-204ENST00000468105 DENND4CQ5VZ89 1909 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 OBSL1O75147 1896 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 TTC26A0AVF1 554 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 PATE3B3GLJ2 98 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 SPTLC2O15270 562 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 FAM189A1O60320 539 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 RNF40O75150 1001 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 NMT1P30419 496 aaKnown RBP14.72□□□□□ -0.05
RPP40-204ENST00000468105 CCT6AP40227 531 aaKnown RBP14.72□□□□□ -0.05
RPP40-204ENST00000468105 EPHB3P54753 998 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 FOXC1Q12948 553 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 ARL6IP4Q66PJ3 421 aaKnown RBP14.72□□□□□ -0.05
RPP40-204ENST00000468105 RNF43Q68DV7 783 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 C1orf186Q6ZWK4 172 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 LRRTM3Q86VH5 581 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 SYNPOQ8N3V7 929 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 GATA6Q92908 595 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 MMTAG2Q9BU76 263 aaKnown RBP14.72□□□□□ -0.05
RPP40-204ENST00000468105 EBF3Q9H4W6 596 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 LOC400499M0QZD8 3231 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 CACNA1EQ15878 2313 aa14.72□□□□□ -0.05
RPP40-204ENST00000468105 NUP205Q92621 2012 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 CELSR3Q9NYQ7 3312 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 CCDC163A0A0D9SF12 145 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 LNP1A1A4G5 178 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 CDX4O14627 284 aaPredicted RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 TRDMT1O14717 391 aaKnown RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 FOXD2O60548 495 aaPredicted RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 CCDC192P0DO97 292 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 PTMSP20962 102 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 PRPHP41219 470 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 NOVA1P51513 510 aaKnown RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 GALK1P51570 392 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 CEBPZQ03701 1054 aaKnown RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 ITPRIPL2Q3MIP1 535 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 SCARA3Q6AZY7 606 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 RINT1Q6NUQ1 792 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 TCHPQ9BT92 498 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 TASP1Q9H6P5 420 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 OBP2AQ9NY56 170 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 ANKFY1Q9P2R3 1169 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 ASCC3Q8N3C0 2202 aaKnown RBP14.71□□□□□ -0.05
RPP40-204ENST00000468105 SCN1AP35498 2009 aa14.71□□□□□ -0.05
RPP40-204ENST00000468105 LACTBL1A8MY62 500 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 MARCKSP29966 332 aaPredicted RBP14.7□□□□□ -0.06
RPP40-204ENST00000468105 WEE1P30291 646 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 FXR2P51116 673 aaKnown RBP eCLIP14.7□□□□□ -0.06
RPP40-204ENST00000468105 RAD51AP2Q09MP3 1159 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 TMEM161BQ8NDZ6 487 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 GIPC2Q8TF65 315 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 USP13Q92995 863 aaPredicted RBP14.7□□□□□ -0.06
RPP40-204ENST00000468105 NTPCRQ9BSD7 190 aaKnown RBP14.7□□□□□ -0.06
RPP40-204ENST00000468105 EDEM2Q9BV94 578 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 GDPD2Q9HCC8 539 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 KMT5AQ9NQR1 393 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 VPS45Q9NRW7 570 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 PCDHGA5Q9Y5G8 931 aa14.7□□□□□ -0.06
RPP40-204ENST00000468105 PTPRDP23468 1912 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 NPHP3-ACAD11A0A0J9YXS1 232 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 BCLAF3A2AJT9 711 aaKnown RBP14.69□□□□□ -0.06
RPP40-204ENST00000468105 SRRM3A6NNA2 597 aaPredicted RBP14.69□□□□□ -0.06
RPP40-204ENST00000468105 DPYSL4O14531 572 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 F11P03951 625 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 MAPTP10636 758 aaKnown RBP14.69□□□□□ -0.06
RPP40-204ENST00000468105 HMGA1P17096 107 aaKnown RBP14.69□□□□□ -0.06
RPP40-204ENST00000468105 BCKDHBP21953 392 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 ALDH1A3P47895 512 aa14.69□□□□□ -0.06
RPP40-204ENST00000468105 GPR15P49685 360 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms