RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 FAM105AQ9NUU6 356 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 POLLQ9UGP5 575 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 LCMT1Q9UIC8 334 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 KCNG1Q9UIX4 513 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 DMTF1Q9Y222 760 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 HPSEQ9Y251 543 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 EXOC6BQ9Y2D4 811 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 NOC2LQ9Y3T9 749 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 CEP83Q9Y592 693 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 NUB1Q9Y5A7 615 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA9Q9Y5G4 932 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA8Q9Y5G5 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA7Q9Y5G6 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA6Q9Y5G7 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA3Q9Y5H0 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 PCDHGA2Q9Y5H1 932 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 LRRFIP2Q9Y608 721 aaKnown RBP3.79□□□□□ -1.8
SORT1-202ENST00000466471 KALRNO60229 2985 aa3.79□□□□□ -1.8
SORT1-202ENST00000466471 DMXL2Q8TDJ6 3036 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 C2CD3Q4AC94 2353 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 WDR19Q8NEZ3 1342 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TARSL2A2RTX5 802 aaKnown RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 GOLGA6L4A6NEF3 574 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 LRRC10BA6NIK2 292 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 FAM170BA6NMN3 283 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GOLGA8AA7E2F4 631 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GOLGA8BA8MQT2 603 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TMCO5BA8MYB1 307 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 H3BQF6 201 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GOLIM4O00461 696 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 XPOTO43592 962 aaKnown RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 CUTAO60888 179 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 HIP1RO75146 1068 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 PPP6R2O75170 966 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TAF5LO75529 589 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SASH1O94885 1247 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ZNF205O95201 554 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 PRNPP04156 253 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 C8AP07357 584 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 EPB41P11171 864 aaKnown RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 SRFP11831 508 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 HSD3B1P14060 373 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 AGXTP21549 392 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 MCM3P25205 808 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SERPINB3P29508 390 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 PBX1P40424 430 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 USP8P40818 1118 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SLC5A3P53794 718 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 JAG1P78504 1218 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ITIH3Q06033 890 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 STK3Q13188 491 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SNAPC2Q13487 334 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GRAPQ13588 217 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 VGLL4Q14135 290 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SNX17Q15036 470 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 RAB30Q15771 203 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 HLFQ16534 295 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 CAMK4Q16566 473 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 FSCN1Q16658 493 aaKnown RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 WHAMMP3Q1A5X7 153 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 DPY19L1Q2PZI1 675 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ANO4Q32M45 955 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SUPT20HL1Q3ZLR7 823 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TTC31Q49AM3 519 aaPredicted RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 FIGNQ5HY92 759 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 DGKKQ5KSL6 1271 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 WLSQ5T9L3 541 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 WDR78Q5VTH9 848 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TTLL5Q6EMB2 1281 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ISM2Q6H9L7 571 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 C1orf228Q6PIY5 440 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 BLOC1S2Q6QNY1 142 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 LRRC31Q6UY01 552 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ZNF572Q7Z3I7 529 aaPredicted RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 UBE3BQ7Z3V4 1068 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 PPP1R42Q7Z4L9 355 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 CCDC91Q7Z6B0 441 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TADA2BQ86TJ2 420 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 VSIG10LQ86VR7 867 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ZNF354CQ86Y25 554 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 CCDC103Q8IW40 242 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 DRC7Q8IY82 874 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 NLGN4XQ8N0W4 816 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 TTC5Q8N0Z6 440 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 ADSSL1Q8N142 457 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 SPATA5Q8NB90 893 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 LINC00301Q8NCQ3 95 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 CCDC191Q8NCU4 936 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 C3orf20Q8ND61 904 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 RCBTB1Q8NDN9 531 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 NSUN7Q8NE18 718 aaKnown RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 NEK11Q8NG66 645 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.78□□□□□ -1.8
SORT1-202ENST00000466471 CTCFLQ8NI51 663 aaPredicted RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 SPATA20Q8TB22 786 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 DEPTORQ8TB45 409 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GRAPLQ8TC17 118 aaPredicted RBP3.78□□□□□ -1.8
SORT1-202ENST00000466471 KCNG4Q8TDN1 519 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 GOLGA1Q92805 767 aa3.78□□□□□ -1.8
SORT1-202ENST00000466471 RILPL2Q969X0 211 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms