RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CBX2Q14781 532 aaPredicted RBP13.26□□□□□ -0.29
CHPF2-202ENST00000465601 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 CBWD6Q4V339 395 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 CBWD3Q5JTY5 395 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 CBWD5Q5RIA9 395 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 TCEAL8Q8IYN2 117 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 OR6B3Q8NGW1 331 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SPATA18Q8TC71 538 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
CHPF2-202ENST00000465601 TAF4BQ92750 862 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 ZNF707Q96C28 371 aaPredicted RBP13.26□□□□□ -0.29
CHPF2-202ENST00000465601 RIPOR3Q96MK2 946 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
CHPF2-202ENST00000465601 ACBD6Q9BR61 282 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SNX25Q9H3E2 840 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SMYD3Q9H7B4 428 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 ZDHHC7Q9NXF8 308 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 SLC27A5Q9Y2P5 690 aa13.26□□□□□ -0.29
CHPF2-202ENST00000465601 MTMR11A4FU01 709 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 TACC1O75410 805 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 FAM163BP0C2L3 166 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 RAP1GAPP47736 663 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 IRF2BP1Q8IU81 584 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 TRIM59Q8IWR1 403 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 DCP1BQ8IZD4 617 aaKnown RBP13.25□□□□□ -0.29
CHPF2-202ENST00000465601 FBXL13Q8NEE6 735 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 SDCBP2Q9H190 292 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 APOBEC3GQ9HC16 384 aaKnown RBP13.25□□□□□ -0.29
CHPF2-202ENST00000465601 TMLHEQ9NVH6 421 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 ANO10Q9NW15 660 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 RAB20Q9NX57 234 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 GTF3C4Q9UKN8 822 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 MAFFQ9ULX9 164 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 NME7Q9Y5B8 376 aa13.25□□□□□ -0.29
CHPF2-202ENST00000465601 MYBPHLA2RUH7 354 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 ATP2C2O75185 946 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 LRG1P02750 347 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 P4HA1P13674 534 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 PTMSP20962 102 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 PCSK1P29120 753 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 HOXA9P31269 272 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 FMO5P49326 533 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 MARSP56192 900 aaKnown RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 PSMC1P62191 440 aaKnown RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 NOP14P78316 857 aaKnown RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 KCNH2Q12809 1159 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 STX1AQ16623 288 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 KLHL40Q2TBA0 621 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 CT47A1Q5JQC4 288 aaPredicted RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 INTS6LQ5JSJ4 861 aaKnown RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 C11orf57Q6ZUT1 292 aaPredicted RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 TTC9BQ8N6N2 239 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 CCDC150Q8NCX0 1101 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 TATDN2Q93075 761 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 CNOT6LQ96LI5 555 aaKnown RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 NECTIN4Q96NY8 510 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 SYT15Q9BQS2 421 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 ABI2Q9NYB9 513 aaPredicted RBP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 COQ4Q9Y3A0 265 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.24□□□□□ -0.29
CHPF2-202ENST00000465601 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
CHPF2-202ENST00000465601 A8MXQ7 604 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 XYLBO75191 536 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 SOAT2O75908 522 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 PAPLNO95428 1278 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 SP100P23497 879 aaPredicted RBP13.23□□□□□ -0.29
CHPF2-202ENST00000465601 ASPAP45381 313 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 NTHL1P78549 312 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 TYRO3Q06418 890 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 TWF1Q12792 350 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 HSP90AA4PQ58FG1 418 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 WDR44Q5JSH3 913 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 CYP26C1Q6V0L0 522 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
CHPF2-202ENST00000465601 ENOX1Q8TC92 643 aaKnown RBP13.23□□□□□ -0.29
CHPF2-202ENST00000465601 RPGRIP1Q96KN7 1286 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 UHRF1Q96T88 793 aaPredicted RBP13.23□□□□□ -0.29
CHPF2-202ENST00000465601 PKMYT1Q99640 499 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 LPIN3Q9BQK8 851 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 PHF7Q9BWX1 381 aaPredicted RBP13.23□□□□□ -0.29
CHPF2-202ENST00000465601 RHOBTB2Q9BYZ6 727 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 DPEP3Q9H4B8 488 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 THAP9Q9H5L6 903 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 CRTAC1Q9NQ79 661 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 HCFC1R1Q9NWW0 138 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 CDH9Q9ULB4 789 aa13.23□□□□□ -0.29
CHPF2-202ENST00000465601 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms