RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 FSHRP23945 695 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 ERCC5P28715 1186 aaPredicted RBP18.26■□□□□ 0.51
VPS52-215ENST00000464425 GCLMP48507 274 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 MYL7Q01449 175 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 TSPY1Q01534 308 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 PAK1Q13153 545 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 SV2AQ7L0J3 742 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 ZC3H3Q8IXZ2 948 aaKnown RBP18.26■□□□□ 0.51
VPS52-215ENST00000464425 TTC9BQ8N6N2 239 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 MYADMQ96S97 322 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 XYLT2Q9H1B5 865 aa18.26■□□□□ 0.51
VPS52-215ENST00000464425 SOAT2O75908 522 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 POU2F2P09086 479 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 PTPN2P17706 415 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 LMO2P25791 158 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 ATICP31939 592 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 LHX1P48742 406 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 TNNC1P63316 161 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 FKBP3Q00688 224 aaKnown RBP18.25■□□□□ 0.51
VPS52-215ENST00000464425 PPP3CAQ08209 521 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 STX1AQ16623 288 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 ZNF699Q32M78 642 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 ZACNQ401N2 412 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 PABPC1LQ4VXU2 614 aaKnown RBP18.25■□□□□ 0.51
VPS52-215ENST00000464425 TTI2Q6NXR4 508 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 DPH6Q7L8W6 267 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 LIMS2Q7Z4I7 341 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 DCP1BQ8IZD4 617 aaKnown RBP18.25■□□□□ 0.51
VPS52-215ENST00000464425 ZDHHC14Q8IZN3 488 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 KBTBD7Q8WVZ9 684 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 ACBD6Q9BR61 282 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 CORO1BQ9BR76 489 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 MRPL45Q9BRJ2 306 aaKnown RBP18.25■□□□□ 0.51
VPS52-215ENST00000464425 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.25■□□□□ 0.513e-13■■■■■ 167.7
VPS52-215ENST00000464425 TMLHEQ9NVH6 421 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 CEP72Q9P209 647 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 CTNND2Q9UQB3 1225 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 YIPF1Q9Y548 306 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 TSC2P49815 1807 aa18.25■□□□□ 0.51
VPS52-215ENST00000464425 PI4K2BG5E9Z4 385 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 GABRDO14764 452 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 DCXO43602 365 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ASGR2P07307 311 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 RHOP08100 348 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 PDGFRBP09619 1106 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ALDH1A3P47895 512 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 STX17P56962 302 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 TYRO3Q06418 890 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 MGAT5BQ3V5L5 792 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ELMOD1Q8N336 334 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 PLCD3Q8N3E9 789 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ITFG1Q8TB96 612 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ZNF512Q96ME7 567 aaPredicted RBP18.24■□□□□ 0.51
VPS52-215ENST00000464425 SEPT5Q99719 369 aaPredicted RBP18.24■□□□□ 0.51
VPS52-215ENST00000464425 MKNK1Q9BUB5 465 aa18.24■□□□□ 0.51
VPS52-215ENST00000464425 ABI2Q9NYB9 513 aaPredicted RBP18.24■□□□□ 0.51
VPS52-215ENST00000464425 ATP2C2O75185 946 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 STAU1O95793 577 aaKnown RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 HLA-DRAP01903 254 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 ALADP13716 330 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 WARSP23381 471 aaKnown RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 GNL1P36915 607 aaPredicted RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 PIK3CAP42336 1068 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 EPHB3P54753 998 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 MCCD1P59942 119 aaPredicted RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 CCDC142Q17RM4 750 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 SGSM1Q2NKQ1 1148 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 ZSCAN23Q3MJ62 389 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 ZNF667Q5HYK9 610 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 INTS6LQ5JSJ4 861 aaKnown RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 IQCEQ6IPM2 695 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 HS6ST3Q8IZP7 471 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 ST13P5Q8NFI4 369 aaPredicted RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 OR6B3Q8NGW1 331 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 SPATA18Q8TC71 538 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 CEP63Q96MT8 703 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 DUSP9Q99956 384 aaKnown RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 PI4K2AQ9BTU6 479 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 SNX25Q9H3E2 840 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.23■□□□□ 0.51
VPS52-215ENST00000464425 GTF3C4Q9UKN8 822 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 MRPS23Q9Y3D9 190 aaKnown RBP18.23■□□□□ 0.51
VPS52-215ENST00000464425 PCDHB5Q9Y5E4 795 aa18.23■□□□□ 0.51
VPS52-215ENST00000464425 SYCE3A1L190 88 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 MYBPHLA2RUH7 354 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SLC16A3O15427 465 aaKnown RBP18.22■□□□□ 0.51
VPS52-215ENST00000464425 PCSK1P29120 753 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 CDH8P55286 799 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 PSMC1P62191 440 aaKnown RBP18.22■□□□□ 0.51
VPS52-215ENST00000464425 ENPEPQ07075 957 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SMARCB1Q12824 385 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 PLD1Q13393 1074 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SLC5A9Q2M3M2 681 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SPOPLQ6IQ16 392 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 SCARA5Q6ZMJ2 495 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 FAM200AQ8TCP9 573 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 TAS1R2Q8TE23 839 aa18.22■□□□□ 0.51
VPS52-215ENST00000464425 C2orf15Q8WU43 125 aaKnown RBP18.22■□□□□ 0.51
VPS52-215ENST00000464425 ING5Q8WYH8 240 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms