RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 CCDC40Q4G0X9 1142 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CBWD6Q4V339 395 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SLC39A12Q504Y0 691 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 DCAF17Q5H9S7 520 aaPredicted RBP16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CBWD3Q5JTY5 395 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CBWD5Q5RIA9 395 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TCERG1LQ5VWI1 586 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SPOPLQ6IQ16 392 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 IRF2BP1Q8IU81 584 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ATAD1Q8NBU5 361 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SMG7Q92540 1137 aaKnown RBP16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 NECAB3Q96P71 396 aaPredicted RBP16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PKMYT1Q99640 499 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PI4K2AQ9BTU6 479 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TMLHEQ9NVH6 421 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 DACH1Q9UI36 760 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 COQ4Q9Y3A0 265 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 NME7Q9Y5B8 376 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 VCANP13611 3396 aa16.5■□□□□ 0.23
RAB11FIP3-208ENST00000464263 C19orf67A6NJJ6 358 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CCL16O15467 120 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ACAT1P24752 427 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 GNL1P36915 607 aaPredicted RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 MXI1P50539 228 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CDH8P55286 799 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ZP2Q05996 745 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SMARCB1Q12824 385 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 INTS6LQ5JSJ4 861 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 FAM171BQ6P995 826 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TRIM59Q8IWR1 403 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ADHFE1Q8IWW8 467 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 DCP1BQ8IZD4 617 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 COL25A1Q9BXS0 654 aaPredicted RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SDCBP2Q9H190 292 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SMYD3Q9H7B4 428 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 WDR6Q9NNW5 1121 aaKnown RBP16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 HSFX1Q9UBD0 423 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 INSL5Q9Y5Q6 135 aa16.49■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PMM2O15305 246 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ATP2C2O75185 946 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PDGFRBP09619 1106 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PCSK1P29120 753 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CDR1P51861 262 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TSPY1Q01534 308 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SASS6Q6UVJ0 657 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TTC9BQ8N6N2 239 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 FBXL13Q8NEE6 735 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 OR6B3Q8NGW1 331 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 C2orf15Q8WU43 125 aaKnown RBP16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 UHRF1Q96T88 793 aaPredicted RBP16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 BCO2Q9BYV7 579 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SNX25Q9H3E2 840 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PIDD1Q9HB75 910 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CD320Q9NPF0 282 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 RAB20Q9NX57 234 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 GTF3C4Q9UKN8 822 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CDH9Q9ULB4 789 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SLC27A5Q9Y2P5 690 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PTPRDP23468 1912 aa16.48■□□□□ 0.23
RAB11FIP3-208ENST00000464263 MYBPHLA2RUH7 354 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 XYLBO75191 536 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CCDC192P0DO97 292 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 P4HA1P13674 534 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ASPAP45381 313 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 RAP1GAPP47736 663 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 FMO5P49326 533 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CAVIN1Q6NZI2 390 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 GRASPQ7Z6J2 395 aaPredicted RBP16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SYT15Q9BQS2 421 aa16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 DNMT3BQ9UBC3 853 aaKnown RBP16.47■□□□□ 0.23
RAB11FIP3-208ENST00000464263 DOCK8Q8NF50 2099 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 MYO10Q9HD67 2058 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 LRG1P02750 347 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 HAPLN1P10915 354 aaPredicted RBP16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TUFMP49411 452 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 NOP14P78316 857 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TWF1Q12792 350 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 KCNH2Q12809 1159 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 NFE2Q16621 373 aaPredicted RBP16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CCDC142Q17RM4 750 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 KLHL40Q2TBA0 621 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SCARA5Q6ZMJ2 495 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 SPPL2BQ8TCT7 592 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 TATDN2Q93075 761 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 FAXDC2Q96IV6 333 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 RPGRIP1Q96KN7 1286 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CNOT6LQ96LI5 555 aaKnown RBP16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 IMPG2Q9BZV3 1241 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 THAP9Q9H5L6 903 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CRTAC1Q9NQ79 661 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 ANO10Q9NW15 660 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 HCFC1R1Q9NWW0 138 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 CEP72Q9P209 647 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 YIPF1Q9Y548 306 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 PCDHB5Q9Y5E4 795 aa16.46■□□□□ 0.23
RAB11FIP3-208ENST00000464263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms