RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 UMODL1Q5DID0 1318 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 MIF4GDA9UHW6 222 aaKnown RBP15.44■□□□□ 0.06
COL5A1-205ENST00000464187 MGEA5O60502 916 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 HSF2BPO75031 334 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 CALCAP01258 141 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 TBXAS1P24557 533 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-205ENST00000464187 GJA8P48165 433 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 MARCKSL1P49006 195 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 BFSP2Q13515 415 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 CUL1Q13616 776 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 CUL2Q13617 745 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 NAA35Q5VZE5 725 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 SLC39A5Q6ZMH5 540 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 LRRC8DQ7L1W4 858 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 EIF1ADQ8N9N8 165 aaKnown RBP15.44■□□□□ 0.06
COL5A1-205ENST00000464187 ZNF564Q8TBZ8 553 aaPredicted RBP15.44■□□□□ 0.06
COL5A1-205ENST00000464187 KRT35Q92764 455 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 ZSWIM1Q9BR11 485 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 NUP85Q9BW27 656 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 DPP3Q9NY33 737 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 AMACRQ9UHK6 382 aa15.44■□□□□ 0.06
COL5A1-205ENST00000464187 SELPP16109 830 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 POLR2BP30876 1174 aaKnown RBP15.43■□□□□ 0.06
COL5A1-205ENST00000464187 MESDQ14696 234 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ZBTB6Q15916 424 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 CLEC16AQ2KHT3 1053 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 XKR4Q5GH76 650 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ACAD10Q6JQN1 1059 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 DIS3LQ8TF46 1054 aaKnown RBP15.43■□□□□ 0.06
COL5A1-205ENST00000464187 CD101Q93033 1021 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ZIM3Q96PE6 472 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 TRAIPQ9BWF2 469 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 SMIM28A0A1B0GU29 152 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 MEIS3P2A8K0S8 358 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 TTI1O43156 1089 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 COMTP21964 271 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 DSC3Q14574 896 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 AADACL2Q6P093 401 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ANKRD33Q7Z3H0 272 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL5A1-205ENST00000464187 CPNE8Q86YQ8 564 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 HACE1Q8IYU2 909 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 UBL4BQ8N7F7 174 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.43■□□□□ 0.067e-7■■■■■ 64.9
COL5A1-205ENST00000464187 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 ADAM2Q99965 735 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 NIF3L1Q9GZT8 377 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 AGAP1Q9UPQ3 857 aa15.43■□□□□ 0.06
COL5A1-205ENST00000464187 A0A0U1RQF3 1178 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 PITPNM1O00562 1244 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 TLR3O15455 904 aaKnown RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 COL6A1P12109 1028 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 KCNE1P15382 129 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 HSPA9P38646 679 aaKnown RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 RBP5P82980 135 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 HLTFQ14527 1009 aaKnown RBP eCLIP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 KCTD19Q17RG1 926 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 WDR72Q3MJ13 1102 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 MAATS1Q7Z4T9 603 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 BEST2Q8NFU1 509 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 CCDC26Q8TAB7 109 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 PIK3R5Q8WYR1 880 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 SEC14L1Q92503 715 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 C18orf25Q96B23 403 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 ZFP42Q96MM3 310 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 NAP1L3Q99457 506 aaPredicted RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 NEUROG2Q9H2A3 272 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 UVRAGQ9P2Y5 699 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 TUBGCP4Q9UGJ1 667 aa15.42■□□□□ 0.06
COL5A1-205ENST00000464187 UBQLN1Q9UMX0 589 aaKnown RBP15.42■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA8KD6RF30 607 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 OPA1O60313 960 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 ZNF623O75123 536 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 ACO1P21399 889 aaKnown RBP15.41■□□□□ 0.06
COL5A1-205ENST00000464187 ATICP31939 592 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 PEX5P50542 639 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 RAB27AP51159 221 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 ZNF667Q5HYK9 610 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 CFAP58Q5T655 872 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 ADAT2Q7Z6V5 191 aaKnown RBP15.41■□□□□ 0.06
COL5A1-205ENST00000464187 IQCKQ8N0W5 287 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA6L1Q8N7Z2 621 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 LPPQ93052 612 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 HPDLQ96IR7 371 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 TSPAN18Q96SJ8 248 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 RUFY1Q96T51 708 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 WNT8AQ9H1J5 351 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 VRTNQ9H8Y1 702 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 NXF1Q9UBU9 619 aaKnown RBP15.41■□□□□ 0.06
COL5A1-205ENST00000464187 CITO14578 2027 aa15.41■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA6CA6NDK9 693 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 GOLGA6DP0CG33 693 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 UNGP13051 313 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-205ENST00000464187 CTNNA2P26232 953 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 MLH1P40692 756 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 ASPAP45381 313 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 CLUL1Q15846 466 aa15.4■□□□□ 0.06
COL5A1-205ENST00000464187 TRIM60Q495X7 471 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms