RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 ZNF750Q32MQ0 723 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ZKSCAN2Q63HK3 967 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 GRAMD4Q6IC98 578 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 MILR1Q7Z6M3 343 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 UBE2Q1Q7Z7E8 422 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 GOLGA1Q92805 767 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 KCNN1Q92952 543 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 BORCS6Q96GS4 357 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 CPEB1Q9BZB8 566 aaKnown RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 CWC25Q9NXE8 425 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 DNMT3BQ9UBC3 853 aaKnown RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 PEG3Q9GZU2 1588 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 VWA3AA6NCI4 1184 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 IGLV1-40P01703 118 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 CLEC3BP05452 202 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 ZSCAN22P10073 491 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 CHMP24386 653 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 EPHA8P29322 1005 aaPredicted RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 MMP14P50281 582 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DCAF12L1Q5VU92 463 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 MRNIPQ6NTE8 343 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 TBC1D22AQ8WUA7 517 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DDX17Q92841 729 aaKnown RBP3.44□□□□□ -1.86
SMC4-203ENST00000462668 TMX3Q96JJ7 454 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 NDC1Q9BTX1 674 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 MID2Q9UJV3 735 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 DAPP1Q9UN19 280 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 CNPY2Q9Y2B0 182 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 COL15A1P39059 1388 aa3.44□□□□□ -1.86
SMC4-203ENST00000462668 UBE2CO00762 179 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TSPAN3O60637 253 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 MED26O95402 600 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 CHEK2O96017 543 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 KNG1P01042 644 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 C8BP07358 591 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 HNRNPCP07910 306 aaKnown RBP eCLIP3.43□□□□□ -1.86
SMC4-203ENST00000462668 ZNF200P98182 395 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 TOP3AQ13472 1001 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 LINC00482Q8N8I6 264 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 BCL7CQ8WUZ0 217 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 MFSD14AQ96MC6 490 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 KCNF1Q9H3M0 494 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ZMYND8Q9ULU4 1186 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 C19orf53Q9UNZ5 99 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 GOLGA6L10A0A0M3HER8 536 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 PJA2O43164 708 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 AKR1B10O60218 316 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 CYP21A2P08686 494 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 IL2RBP14784 551 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 AKR1B1P15121 316 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SYN1P17600 705 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 XBP1P17861 261 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 GDNFP39905 211 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SLC11A2P49281 568 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TOB1P50616 345 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 EXOSC9Q06265 439 aaKnown RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 CUL4BQ13620 913 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 EIF4A2Q14240 407 aaKnown RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 PRR31Q5SQ13 230 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 RPTNQ6XPR3 784 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 RNF44Q7L0R7 432 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 GPRIN1Q7Z2K8 1008 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 HVCN1Q96D96 273 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 AP1M1Q9BXS5 423 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 BRD9Q9H8M2 597 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 KLHL14Q9P2G3 628 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TAF6LQ9Y6J9 622 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 H3BNC9 293 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ACTL6BO94805 426 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SBK3P0C264 359 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 MYCLP12524 364 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 FOSL1P15407 271 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 PSMA3P25788 255 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 CUL4AQ13619 759 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ZDHHC24Q6UX98 284 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 IRF2BP1Q8IU81 584 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 CCDC28AQ8IWP9 274 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 PQLC1Q8N2U9 271 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SHKBP1Q8TBC3 707 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 GPR63Q9BZJ6 419 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 C11orf54Q9H0W9 315 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 VPS16Q9H269 839 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 SAE1Q9UBE0 346 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 SLC25A10Q9UBX3 287 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 SRRDQ9UH36 339 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TAF4O00268 1085 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 GSC2O15499 205 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 GPR32O75388 356 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 MTA2O94776 668 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 APOL3O95236 402 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 KRT1P04264 644 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 CLK1P49759 484 aaKnown RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 PTTG1IPP53801 180 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 TERF1P54274 439 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 EPS8Q12929 822 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 PLEKHN1Q494U1 663 aaPredicted RBP3.43□□□□□ -1.86
SMC4-203ENST00000462668 CEP128Q6ZU80 1094 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 ZNF365Q70YC5 407 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 LRRC71Q8N4P6 559 aa3.43□□□□□ -1.86
SMC4-203ENST00000462668 LSM14AQ8ND56 463 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms