RNA–Protein interactions for RNA: ENST00000462335.1

PKP4-208, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-208ENST00000462335 FAM163BP0C2L3 166 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 OR4Q2P0C623 313 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 FSHRP23945 695 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 ACAT1P24752 427 aaKnown RBP10.24□□□□□ -0.77
PKP4-208ENST00000462335 ANXA13P27216 316 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 YWHAEP62258 255 aaKnown RBP10.24□□□□□ -0.77
PKP4-208ENST00000462335 CLDN10P78369 228 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 CYP27A1Q02318 531 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 TWF1Q12792 350 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 ZACNQ401N2 412 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 ZCWPW2Q504Y3 356 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 CT47A1Q5JQC4 288 aaPredicted RBP10.24□□□□□ -0.77
PKP4-208ENST00000462335 RSPO2Q6UXX9 243 aaPredicted RBP10.24□□□□□ -0.77
PKP4-208ENST00000462335 SCARA5Q6ZMJ2 495 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 GRASPQ7Z6J2 395 aaPredicted RBP10.24□□□□□ -0.77
PKP4-208ENST00000462335 TCEAL8Q8IYN2 117 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 GJD3Q8N144 294 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 FBXL13Q8NEE6 735 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 SPPL2BQ8TCT7 592 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 GPT2Q8TD30 523 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 TNIP3Q96KP6 325 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 GCNAQ96QF7 691 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 CORO1BQ9BR76 489 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 ZCWPW1Q9H0M4 648 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 S1PR5Q9H228 398 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 CDH9Q9ULB4 789 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 L1RE1Q9UN81 338 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 BRWD1Q9NSI6 2320 aa10.24□□□□□ -0.77
PKP4-208ENST00000462335 ATG2AQ2TAZ0 1938 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 MTCL1Q9Y4B5 1905 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 STAU1O95793 577 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 CDK11BP21127 795 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 WARSP23381 471 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 ERCC5P28715 1186 aaPredicted RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 HOXA9P31269 272 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 PMS1P54277 932 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 RPL10AP62906 217 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 STX1AQ16623 288 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 SOWAHAQ2M3V2 549 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 SKOR2Q2VWA4 1001 aaPredicted RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 PABPC1LQ4VXU2 614 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 TTI2Q6NXR4 508 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 CAVIN1Q6NZI2 390 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 FOXR2Q6PJQ5 311 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 PDZD4Q76G19 769 aaPredicted RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 SCN4BQ8IWT1 228 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 TTC39CQ8N584 583 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 ATAD1Q8NBU5 361 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 BORCS6Q96GS4 357 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 SYT15Q9BQS2 421 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 PI4K2AQ9BTU6 479 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 ASAH2Q9NR71 780 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 RAB20Q9NX57 234 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.23□□□□□ -0.779e-8■■■■■ 27
PKP4-208ENST00000462335 EHD2Q9NZN4 543 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 GTF3C4Q9UKN8 822 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 MRPS23Q9Y3D9 190 aaKnown RBP10.23□□□□□ -0.77
PKP4-208ENST00000462335 ASB3Q9Y575 518 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 INSL5Q9Y5Q6 135 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 VWA8A3KMH1 1905 aa10.23□□□□□ -0.77
PKP4-208ENST00000462335 TNFRSF10AO00220 468 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 TBC1D4O60343 1298 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 TACC1O75410 805 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 FGF19O95750 216 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 AFPP02771 609 aaKnown RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 MYL4P12829 197 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 PRKCSHP14314 528 aaPredicted RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 BMP6P22004 513 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 GRIK1P39086 918 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 CDR1P51861 262 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 NOP14P78316 857 aaKnown RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 PPP3CAQ08209 521 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 ARHGAP15Q53QZ3 475 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 INTS6LQ5JSJ4 861 aaKnown RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 GET4Q7L5D6 327 aaPredicted RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 LEMD2Q8NC56 503 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 OR10T2Q8NGX3 314 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 PLEKHO2Q8TD55 490 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 TAS1R2Q8TE23 839 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 SUSD6Q92537 303 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 NECAB3Q96P71 396 aaPredicted RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 TMEM209Q96SK2 561 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 DUSP9Q99956 384 aaKnown RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 NIF3L1Q9GZT8 377 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 POMKQ9H5K3 350 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 SLITRK6Q9H5Y7 841 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 CYP3A43Q9HB55 503 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 WDR6Q9NNW5 1121 aaKnown RBP10.22□□□□□ -0.77
PKP4-208ENST00000462335 CLUHO75153 1309 aa10.22□□□□□ -0.77
PKP4-208ENST00000462335 PLXNA3P51805 1871 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 MTMR11A4FU01 709 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 SEC24AO95486 1093 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 ASS1P00966 412 aaKnown RBP10.21□□□□□ -0.77
PKP4-208ENST00000462335 ALADP13716 330 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 PTPN1P18031 435 aaKnown RBP10.21□□□□□ -0.77
PKP4-208ENST00000462335 CD58P19256 250 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 LMO2P25791 158 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 RAP1GAPP47736 663 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 FMO5P49326 533 aa10.21□□□□□ -0.77
PKP4-208ENST00000462335 CDH8P55286 799 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms