RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 C11orf49Q9H6J7 331 aa5.89□□□□□ -1.47
COPS3-204ENST00000462236 KLHL42Q9P2K6 505 aa5.89□□□□□ -1.47
COPS3-204ENST00000462236 DPP7Q9UHL4 492 aa5.89□□□□□ -1.47
COPS3-204ENST00000462236 USP18Q9UMW8 372 aa5.89□□□□□ -1.47
COPS3-204ENST00000462236 GIT1Q9Y2X7 761 aa5.89□□□□□ -1.47
COPS3-204ENST00000462236 ZNF236Q9UL36 1845 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 XIRP2A4UGR9 3374 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 MROH6A6NGR9 719 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 TNPO2O14787 897 aaKnown RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 AKAP10O43572 662 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA12O60330 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 WASP42768 502 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 KCNC1P48547 511 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 KCNQ1P51787 676 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 IFIT5Q13325 482 aaKnown RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 RALBP1Q15311 655 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCBP2Q15366 365 aaKnown RBP eCLIP5.88□□□□□ -1.47
COPS3-204ENST00000462236 BORAQ6PGQ7 559 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 LMBR1LQ6UX01 489 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 BTNL9Q6UXG8 535 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 FASTKD5Q7L8L6 764 aaKnown RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 CPA6Q8N4T0 437 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 VGLL2Q8N8G2 317 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 TSPEARQ8WU66 669 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 DNAAF4Q8WXU2 420 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 TRIB2Q92519 343 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 MBD6Q96DN6 1003 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 SPATA25Q9BR10 227 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 ACE2Q9BYF1 805 aaPredicted RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 JADE2Q9NQC1 790 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 RAPGEFL1Q9UHV5 662 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 EDARQ9UNE0 448 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 INVSQ9Y283 1065 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 ANKRD6Q9Y2G4 727 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA9Q9Y5G4 932 aaKnown RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA8Q9Y5G5 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA7Q9Y5G6 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA6Q9Y5G7 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA3Q9Y5H0 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 PCDHGA2Q9Y5H1 932 aa5.88□□□□□ -1.47
COPS3-204ENST00000462236 COL11A1P12107 1806 aaPredicted RBP5.88□□□□□ -1.47
COPS3-204ENST00000462236 RIF1Q5UIP0 2472 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 PMS2P1A4D2B8 440 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 CELA3BP08861 270 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 RAB27AP51159 221 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 ADKP55263 362 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 NFYCQ13952 458 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 CLUL1Q15846 466 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 LDHAL6AQ6ZMR3 332 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 PLEKHH3Q7Z736 793 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 RALYLQ86SE5 291 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 SIAH1Q8IUQ4 282 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 LRRC56Q8IYG6 542 aaPredicted RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 CMTR2Q8IYT2 770 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 SCYL3Q8IZE3 742 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 JADE3Q92613 823 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 USP6NLQ92738 828 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 COA7Q96BR5 231 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 KAZALD1Q96I82 304 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 TEKT5Q96M29 485 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 PUS3Q9BZE2 481 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 OR10A2Q9H208 303 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 PRDM12Q9H4Q4 367 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 MYH16Q9H6N6 1097 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.87□□□□□ -1.47
COPS3-204ENST00000462236 MORF4L1Q9UBU8 362 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 EVLQ9UI08 416 aaPredicted RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 CDC42EP3Q9UKI2 254 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 ZBTB21Q9ULJ3 1066 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 PNMA8BQ9ULN7 279 aaPredicted RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 AGTPBP1Q9UPW5 1226 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 LUC7L2Q9Y383 392 aaKnown RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 CTDP1Q9Y5B0 961 aaPredicted RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 MAST3O60307 1309 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 KIF16BQ96L93 1317 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 MYH8P13535 1937 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 MYO7AQ13402 2215 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 PTPRZ1P23471 2315 aaPredicted RBP5.87□□□□□ -1.47
COPS3-204ENST00000462236 CACNA1AO00555 2505 aa5.87□□□□□ -1.47
COPS3-204ENST00000462236 FAM186AA6NE01 2351 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 A0A1W2PR48 441 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 XPOTO43592 962 aaKnown RBP5.86□□□□□ -1.47
COPS3-204ENST00000462236 FGFR2P21802 821 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 GJA9P57773 515 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 MALLQ13021 153 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 ACAP2Q15057 778 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 PCOLCEQ15113 449 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 PPP2R5AQ15172 486 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 SURF1Q15526 300 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 ZNF124Q15973 351 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 ADRM1Q16186 407 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 ZNF568Q3ZCX4 644 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 C19orf54Q5BKX5 351 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 MUM1L1Q5H9M0 696 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 TREML2Q5T2D2 321 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 BEND3Q5T5X7 828 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 AGBL4Q5VU57 503 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 CDC42EP5Q6NZY7 148 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 GAREM2Q75VX8 874 aa5.86□□□□□ -1.47
COPS3-204ENST00000462236 CLEC14AQ86T13 490 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms