RNA–Protein interactions for RNA: ENST00000461041.1

SNAPC3-204, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 2

Gene SNAPC3, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-204ENST00000461041 DCP1BQ8IZD4 617 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 TAS1R2Q8TE23 839 aa21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 TAF4BQ92750 862 aa21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 MRPL45Q9BRJ2 306 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 METTL14Q9HCE5 456 aaKnown RBP21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 RWDD2AQ9UIY3 292 aa21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 NR2E1Q9Y466 385 aa21.48■■□□□ 1.03
SNAPC3-204ENST00000461041 TNFRSF10AO00220 468 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 STX10O60499 249 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 ASS1P00966 412 aaKnown RBP21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 FAM163BP0C2L3 166 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 LMO2P25791 158 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 PCSK1P29120 753 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 CDR1P51861 262 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 NTHL1P78549 312 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 SMARCB1Q12824 385 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 CCDC40Q4G0X9 1142 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 INTS6LQ5JSJ4 861 aaKnown RBP21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 KRT39Q6A163 491 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 FRMD5Q7Z6J6 570 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 TTC9BQ8N6N2 239 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 TMLHEQ9NVH6 421 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 HCFC1R1Q9NWW0 138 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 SLC27A5Q9Y2P5 690 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 YIPF1Q9Y548 306 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 A0A0C4DFX4 3053 aa21.47■■□□□ 1.03
SNAPC3-204ENST00000461041 C2CD4DB7Z1M9 353 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 MXI1P50539 228 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 NLRP12P59046 1061 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 TWF1Q12792 350 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 DPCR1Q3MIW9 517 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 C2orf15Q8WU43 125 aaKnown RBP21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 MED15Q96RN5 788 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 PKMYT1Q99640 499 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 PI4K2AQ9BTU6 479 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 SRRTQ9BXP5 876 aaKnown RBP21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 SNX25Q9H3E2 840 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 SMYD3Q9H7B4 428 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 DNMT3BQ9UBC3 853 aaKnown RBP21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 HSFX1Q9UBD0 423 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 USTQ9Y2C2 406 aa21.46■■□□□ 1.03
SNAPC3-204ENST00000461041 GNL1P36915 607 aaPredicted RBP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 CDH8P55286 799 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 NFE2Q16621 373 aaPredicted RBP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 SPOPLQ6IQ16 392 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 SCARA5Q6ZMJ2 495 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 RBM43Q6ZSC3 357 aaKnown RBP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 OTOP3Q7RTS5 596 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 TDRD5Q8NAT2 981 aaKnown RBP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 OR6B3Q8NGW1 331 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 SPPL2BQ8TCT7 592 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 SLC35C1Q96A29 364 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 SYT15Q9BQS2 421 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 IMPG2Q9BZV3 1241 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 ABI2Q9NYB9 513 aaPredicted RBP21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 GTF3C4Q9UKN8 822 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 CDH9Q9ULB4 789 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 NME7Q9Y5B8 376 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 PCDHB5Q9Y5E4 795 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 C5orf42Q9H799 3197 aa21.45■■□□□ 1.02
SNAPC3-204ENST00000461041 VCANP13611 3396 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 ATP2C2O75185 946 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 PDGFRBP09619 1106 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 P4HA1P13674 534 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 PTPN2P17706 415 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 FSHRP23945 695 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 RAP1GAPP47736 663 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 ALDH1A3P47895 512 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 PSMC1P62191 440 aaKnown RBP21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 PLD1Q13393 1074 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 CCDC142Q17RM4 750 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 CBWD6Q4V339 395 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 PABPC1LQ4VXU2 614 aaKnown RBP21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 CBWD3Q5JTY5 395 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 CBWD5Q5RIA9 395 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 ELMOD1Q8N336 334 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 FBXL13Q8NEE6 735 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 SEPT5Q99719 369 aaPredicted RBP21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 SDCBP2Q9H190 292 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 CEP72Q9P209 647 aa21.44■■□□□ 1.02
SNAPC3-204ENST00000461041 MYBPHLA2RUH7 354 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 N4BP1O75113 896 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 LRRN2O75325 713 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 SOAT2O75908 522 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 FGFR1OPO95684 399 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 GNA14O95837 355 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 RHOP08100 348 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 TUFMP49411 452 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 NOP14P78316 857 aaKnown RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 MGAT5BQ3V5L5 792 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 FAM171BQ6P995 826 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 GET4Q7L5D6 327 aaPredicted RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 RNF135Q8IUD6 432 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 CCDC150Q8NCX0 1101 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 SEMA4DQ92854 862 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 ACSF2Q96CM8 615 aaPredicted RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 ZNF512Q96ME7 567 aaPredicted RBP21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 CORO1BQ9BR76 489 aa21.43■■□□□ 1.02
SNAPC3-204ENST00000461041 DNAJC25Q9H1X3 360 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms