RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TRIM59Q8IWR1 403 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 ADGRF2Q8IZF7 708 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 SMRP1Q8NCR6 262 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
APTX-209ENST00000460940 MED15Q96RN5 788 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 PRDM6Q9NQX0 595 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 FAM50BQ9Y247 325 aa11.87□□□□□ -0.51
APTX-209ENST00000460940 H3BQ06 376 aaPredicted RBP11.86□□□□□ -0.51
APTX-209ENST00000460940 TACC1O75410 805 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 ABLIM3O94929 683 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 CLSTN1O94985 981 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 PAPLNO95428 1278 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 CPB1P15086 417 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 WARSP23381 471 aaKnown RBP11.86□□□□□ -0.51
APTX-209ENST00000460940 PCSK1P29120 753 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 MYL7Q01449 175 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 TYRO3Q06418 890 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 DLX2Q07687 328 aaPredicted RBP11.86□□□□□ -0.51
APTX-209ENST00000460940 SMARCB1Q12824 385 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 SOWAHAQ2M3V2 549 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 WDR72Q3MJ13 1102 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 SCARA3Q6AZY7 606 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.86□□□□□ -0.51
APTX-209ENST00000460940 KREMEN2Q8NCW0 462 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 FBXL13Q8NEE6 735 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 ZNF461Q8TAF7 563 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 TAS1R2Q8TE23 839 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 FAXDC2Q96IV6 333 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 CNOT6LQ96LI5 555 aaKnown RBP11.86□□□□□ -0.51
APTX-209ENST00000460940 ZDHHC7Q9NXF8 308 aa11.86□□□□□ -0.51
APTX-209ENST00000460940 AFF4Q9UHB7 1163 aaKnown RBP11.86□□□□□ -0.51
APTX-209ENST00000460940 WDR27A2RRH5 827 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 GABRDO14764 452 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 P4HA2O15460 535 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 POU2F2P09086 479 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 TNNT1P13805 278 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 HOXA9P31269 272 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 TSPY1Q01534 308 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 ITIH3Q06033 890 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CETN1Q12798 172 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 GPR17Q13304 367 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 SYCE2Q6PIF2 218 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CCDC149Q6ZUS6 474 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 OR10T2Q8NGX3 314 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 ENOX1Q8TC92 643 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 MMS19Q96T76 1030 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 ACBD6Q9BR61 282 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 NAT10Q9H0A0 1025 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 ZCWPW1Q9H0M4 648 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 MMRN2Q9H8L6 949 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 COQ4Q9Y3A0 265 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.85□□□□□ -0.51
APTX-209ENST00000460940 REV3LO60673 3130 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 EYSQ5T1H1 3165 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 HNRNPA1P09651 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
APTX-209ENST00000460940 ATF2P15336 505 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 FMO5P49326 533 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 NOP14P78316 857 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 TFF2Q03403 129 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CBWD6Q4V339 395 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CBWD3Q5JTY5 395 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CBWD5Q5RIA9 395 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 CES5AQ6NT32 575 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 DCP1BQ8IZD4 617 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 C2orf15Q8WU43 125 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 KBTBD7Q8WVZ9 684 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 RTP3Q9BQQ7 232 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 NIF3L1Q9GZT8 377 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 ADAM7Q9H2U9 754 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 FAM124BQ9H5Z6 455 aaPredicted RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 RAB20Q9NX57 234 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 DDX43Q9NXZ2 648 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 HSFX1Q9UBD0 423 aa11.85□□□□□ -0.51
APTX-209ENST00000460940 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 NXF1Q9UBU9 619 aaKnown RBP11.85□□□□□ -0.51
APTX-209ENST00000460940 AP5Z1O43299 807 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 ZMYND10O75800 440 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 AFPP02771 609 aaKnown RBP11.84□□□□□ -0.51
APTX-209ENST00000460940 C8AP07357 584 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 ELF1P32519 619 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 ARPP19P56211 112 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 NECTIN4Q96NY8 510 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 ASB2Q96Q27 587 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 S1PR5Q9H228 398 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 SNX25Q9H3E2 840 aa11.84□□□□□ -0.51
APTX-209ENST00000460940 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.84□□□□□ -0.51
APTX-209ENST00000460940 ERICH4A6NGS2 130 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 PRRG1O14668 218 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 EEF1GP26641 437 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 MTHFRP42898 656 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 ASPAP45381 313 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 HNRNPH2P55795 449 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 MYL5Q02045 173 aa11.83□□□□□ -0.52
APTX-209ENST00000460940 MAPRE1Q15691 268 aaKnown RBP11.83□□□□□ -0.52
APTX-209ENST00000460940 CLUL1Q15846 466 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms