RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 MYL7Q01449 175 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 SOWAHAQ2M3V2 549 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 RTP2Q5QGT7 225 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 KIAA0319Q5VV43 1072 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 RSPO2Q6UXX9 243 aaPredicted RBP16.8■□□□□ 0.28
VCX3B-204ENST00000453306 USP37Q86T82 979 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 OSTM1Q86WC4 334 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 EHBP1Q8NDI1 1231 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 FBXL13Q8NEE6 735 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 PHOX2BQ99453 314 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 RTP3Q9BQQ7 232 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 MFSD1Q9H3U5 465 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 VRTNQ9H8Y1 702 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 SIX2Q9NPC8 291 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 GDAP2Q9NXN4 497 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 LIMD1Q9UGP4 676 aa16.8■□□□□ 0.28
VCX3B-204ENST00000453306 AJAP1Q9UKB5 411 aaPredicted RBP16.8■□□□□ 0.28
VCX3B-204ENST00000453306 CITO14578 2027 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 LGALS16A8MUM7 142 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 STX10O60499 249 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
VCX3B-204ENST00000453306 PON1P27169 355 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 PIK3CAP42336 1068 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 CDH8P55286 799 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 FANCCQ00597 558 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 LRMPQ12912 555 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 TRPC3Q13507 836 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 MRPL58Q14197 206 aaKnown RBP16.79■□□□□ 0.28
VCX3B-204ENST00000453306 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 TMC5Q6UXY8 1006 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 CCDC149Q6ZUS6 474 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 OTOP3Q7RTS5 596 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 ARHGEF19Q8IW93 802 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 KAT5Q92993 513 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 KLHL5Q96PQ7 755 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 MRPL45Q9BRJ2 306 aaKnown RBP16.79■□□□□ 0.28
VCX3B-204ENST00000453306 HERC2P3Q9BVR0 1158 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 RTN4Q9NQC3 1192 aaKnown RBP16.79■□□□□ 0.28
VCX3B-204ENST00000453306 L1RE1Q9UN81 338 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.79■□□□□ 0.28
VCX3B-204ENST00000453306 SNX9Q9Y5X1 595 aa16.79■□□□□ 0.28
VCX3B-204ENST00000453306 KMT2EQ8IZD2 1858 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 CYB561D2O14569 222 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 P4HA2O15460 535 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 ADAM12O43184 909 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 GALR2O43603 387 aaPredicted RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 TBC1D4O60343 1298 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 SOD2P04179 222 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 URODP06132 367 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 ATICP31939 592 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 ASPAP45381 313 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 CLCN4P51793 760 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 WDR72Q3MJ13 1102 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 PHLDB3Q6NSJ2 640 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 GJB7Q6PEY0 223 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 PRSS55Q6UWB4 352 aaPredicted RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 GPR149Q86SP6 731 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 PDCL2Q8N4E4 241 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 LNX1Q8TBB1 728 aaPredicted RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 KBTBD7Q8WVZ9 684 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 ARID3AQ99856 593 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 INTS2Q9H0H0 1204 aaKnown RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 SMYD3Q9H7B4 428 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 NXF1Q9UBU9 619 aaKnown RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 SIK3Q9Y2K2 1263 aa16.78■□□□□ 0.28
VCX3B-204ENST00000453306 PDCD11Q14690 1871 aaKnown RBP16.78■□□□□ 0.28
VCX3B-204ENST00000453306 SF3B1O75533 1304 aaKnown RBP eCLIP16.77■□□□□ 0.28
VCX3B-204ENST00000453306 A0A1B0GTH6 734 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 EPHB6O15197 1021 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 GFRA3O60609 400 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 PDGFBP01127 241 aaPredicted RBP16.77■□□□□ 0.28
VCX3B-204ENST00000453306 CYP11A1P05108 521 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 ASGR2P07307 311 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 ADH1AP07327 375 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 CNPP09543 421 aaKnown RBP16.77■□□□□ 0.28
VCX3B-204ENST00000453306 PNPLA4P41247 253 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 DSG1Q02413 1049 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 NR1I3Q14994 352 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 ZNF699Q32M78 642 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 SV2CQ496J9 727 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
VCX3B-204ENST00000453306 CYP26C1Q6V0L0 522 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 DSTYKQ6XUX3 929 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 CEP57Q86XR8 500 aa16.77■□□□□ 0.28
VCX3B-204ENST00000453306 GTPBP10A4D1E9 387 aaKnown RBP16.76■□□□□ 0.27
VCX3B-204ENST00000453306 GOLGA6L19H0YKK7 550 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 GABRDO14764 452 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 N4BP1O75113 896 aaKnown RBP16.76■□□□□ 0.27
VCX3B-204ENST00000453306 NOL4O94818 638 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 RPL17P18621 184 aaKnown RBP16.76■□□□□ 0.27
VCX3B-204ENST00000453306 LMO2P25791 158 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 CLCN5P51795 746 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
VCX3B-204ENST00000453306 CCDC142Q17RM4 750 aa16.76■□□□□ 0.27
VCX3B-204ENST00000453306 VARS2Q5ST30 1063 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms