RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ZNF200P98182 395 aaPredicted RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 MTMR3Q13615 1198 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 KCNT1Q5JUK3 1230 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 GSTA5Q7RTV2 222 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 CPXM1Q96SM3 734 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 EIF2AQ9BY44 585 aaKnown RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 ELOVL4Q9GZR5 314 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 SCN4AP35499 1836 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 BRCA2P51587 3418 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 A0A1B0GUA9 196 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 H0YGN5 161 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 M0QYV0 167 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 IGF2BP3O00425 579 aaKnown RBP eCLIP12.46□□□□□ -0.41
VTA1-203ENST00000452973 LSM8O95777 96 aaKnown RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 GUCY1A3Q02108 690 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 CYP1B1Q16678 543 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 FAM187BQ17R55 369 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 IQSEC1Q6DN90 963 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 LRRC31Q6UY01 552 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 JOSD2Q8TAC2 188 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 TRIM6Q9C030 488 aaPredicted RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 LRRC19Q9H756 370 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 MTRF1LQ9UGC7 380 aaKnown RBP12.46□□□□□ -0.41
VTA1-203ENST00000452973 NFS1Q9Y697 457 aa12.46□□□□□ -0.41
VTA1-203ENST00000452973 LRRD1A4D1F6 860 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 PSTPIP1O43586 416 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 SMIM10L2AP0DMW4 78 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 SMIM10L2BP0DMW5 78 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 CYP2C9P11712 490 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 KRT3P12035 628 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 NR1D1P20393 614 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 EIF4BP23588 611 aaKnown RBP12.46□□□□□ -0.42
VTA1-203ENST00000452973 AKAP5P24588 427 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 PSMA2P25787 234 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 ADCY8P40145 1251 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 FNTAP49354 379 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 DYNLT1P63172 113 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 PTPN11Q06124 597 aaPredicted RBP12.46□□□□□ -0.42
VTA1-203ENST00000452973 SLC29A2Q14542 456 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 OLFML2BQ68BL8 750 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 C12orf29Q8N999 325 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 SLC4A11Q8NBS3 891 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 DNAJB3Q8WWF6 145 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 TMEM176AQ96HP8 235 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 ASB7Q9H672 318 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 SLC5A4Q9NY91 659 aa12.46□□□□□ -0.42
VTA1-203ENST00000452973 NOVA2Q9UNW9 492 aaKnown RBP12.46□□□□□ -0.42
VTA1-203ENST00000452973 PPEF2O14830 753 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 MED7O43513 233 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 MYL3P08590 195 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 IRAK1P51617 712 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 FKBP1BP68106 108 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 POU5F1BQ06416 359 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 NFX1Q12986 1120 aaKnown RBP12.45□□□□□ -0.42
VTA1-203ENST00000452973 MFSD7Q6UXD7 560 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 RUFY4Q6ZNE9 571 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 TLK2Q86UE8 772 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 SESTD1Q86VW0 696 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 PWWP2AQ96N64 755 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 TMBIM4Q9HC24 238 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 KLK14Q9P0G3 267 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 PCSK1NQ9UHG2 260 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 DCDC2CA8MYV0 355 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 PPFIA2O75334 1257 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 SLCO1A2P46721 670 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 NDST1P52848 882 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 PLCB3Q01970 1234 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 DENND2CQ68D51 928 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 RAPGEF5Q92565 580 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 BCO2Q9BYV7 579 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 METTL5Q9NRN9 209 aaKnown RBP12.45□□□□□ -0.42
VTA1-203ENST00000452973 SNX9Q9Y5X1 595 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 COL1A2P08123 1366 aa12.45□□□□□ -0.42
VTA1-203ENST00000452973 GRAP2O75791 330 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 MICAL2O94851 1124 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 MYCNP04198 464 aaPredicted RBP12.44□□□□□ -0.42
VTA1-203ENST00000452973 CETN2P41208 172 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 CD302Q8IX05 232 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 KATNAL2Q8IYT4 538 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 C18orf25Q96B23 403 aaPredicted RBP12.44□□□□□ -0.42
VTA1-203ENST00000452973 GCOM2Q9BZD3 368 aaPredicted RBP12.44□□□□□ -0.42
VTA1-203ENST00000452973 RSPH14Q9UHP6 348 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 SLC15A5A6NIM6 579 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 CILPO75339 1184 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 GAS8O95995 478 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 ERBB2P04626 1255 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 P4HA1P13674 534 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 IBSPP21815 317 aaPredicted RBP12.44□□□□□ -0.42
VTA1-203ENST00000452973 RGS7P49802 495 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 DRG2P55039 364 aaKnown RBP12.44□□□□□ -0.42
VTA1-203ENST00000452973 RBP5P82980 135 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 HIC1Q14526 733 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
VTA1-203ENST00000452973 IFNLR1Q8IU57 520 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms