RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 RBAKQ9NYW8 714 aaPredicted RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 MTO1Q9Y2Z2 717 aaKnown RBP13□□□□□ -0.33
UBE3B-204ENST00000449510 PCDHB2Q9Y5E7 798 aa13□□□□□ -0.33
UBE3B-204ENST00000449510 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PAEPP09466 180 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 CCNFP41002 786 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 CASP2P42575 452 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 DLGAP5Q15398 846 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 C16orf46Q6P387 395 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 RIBC1Q8N443 379 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 MAGEC3Q8TD91 643 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 UNKQ9C0B0 810 aaKnown RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 MRPL46Q9H2W6 279 aaKnown RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 ACSS2Q9NR19 701 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PIK3CDO00329 1044 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 TPST1O60507 370 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 GPC4O75487 556 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 KRT3P12035 628 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 TYK2P29597 1187 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PTGIRP43119 386 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 NRLP54845 237 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 RPL7AP62424 266 aaKnown RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 ALCAMQ13740 583 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 ANO5Q75V66 913 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 CLNKQ7Z7G1 428 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 LDHDQ86WU2 507 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 L3MBTL3Q96JM7 780 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 DNAJC1Q96KC8 554 aaKnown RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 MIS12Q9H081 205 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 TRPV6Q9H1D0 765 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 CAAP1Q9H8G2 361 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PPEF1O14829 653 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 HNRNPRO43390 633 aaKnown RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 SCNN1BP51168 640 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 TAS2R40P59535 323 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 PPP4CP60510 307 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 ETNPPLQ8TBG4 499 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 VTI1AQ96AJ9 217 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 SUDS3Q9H7L9 328 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-204ENST00000449510 KCNH7Q9NS40 1196 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 MYH2Q9UKX2 1941 aa12.99□□□□□ -0.33
UBE3B-204ENST00000449510 A0A1B0GVG6 124 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 E9PBE3 544 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 KLHL41O60662 606 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 AVILO75366 819 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ELK3P41970 407 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 RGS7P49802 495 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 DRG2P55039 364 aaKnown RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 RPL10AP62906 217 aaKnown RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 IRGCQ6NXR0 463 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 SLC7A3Q8WY07 619 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 OPTNQ96CV9 577 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ERLEC1Q96DZ1 483 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 NMUR2Q9GZQ4 415 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 DDTLA6NHG4 134 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 POLRMTO00411 1230 aaKnown RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 AHCYL1O43865 530 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 PROCP04070 461 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 CETPP11597 493 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 KCNA4P22459 653 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 WASHC2DQ5SRD0 308 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 FAM102AQ5T9C2 384 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 MAP3K21Q5TCX8 1036 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 RNF43Q68DV7 783 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 TRIM42Q8IWZ5 723 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 GSTCDQ8NEC7 633 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 CDKL2Q92772 493 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 NLRP4Q96MN2 994 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 PDP2Q9P2J9 529 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 AGO2Q9UKV8 859 aaKnown RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ZHX2Q9Y6X8 837 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 UBE4BO95155 1302 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 GZMAP12544 262 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 GYS1P13807 737 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 CHRNB2P17787 502 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 SERPINB5P36952 375 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 BCAR1P56945 870 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 FMO1Q01740 532 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 PEX6Q13608 980 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ACSBG2Q5FVE4 666 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 SESTD1Q86VW0 696 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 EGFL6Q8IUX8 553 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 HACE1Q8IYU2 909 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 PDZD8Q8NEN9 1154 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 FEZF2Q8TBJ5 459 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 USP13Q92995 863 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 PGBD4Q96DM1 585 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 OLFM3Q96PB7 478 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 NDNQ99608 321 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 TARS2Q9BW92 718 aaKnown RBP12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ZNF341Q9BYN7 854 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 SIX2Q9NPC8 291 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 GPATCH2LQ9NWQ4 482 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 POLLQ9UGP5 575 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 ARHGAP26Q9UNA1 814 aa12.98□□□□□ -0.33
UBE3B-204ENST00000449510 CCDC189A1A4V9 331 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms