RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 GOLGA8AA7E2F4 631 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 GOLGA8BA8MQT2 603 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 SLC27A2O14975 620 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 MEFVO15553 781 aaPredicted RBP8.04□□□□□ -1.12
RBM39-218ENST00000449489 B4GALT5O43286 388 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 DGAT1O75907 488 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 APBB3O95704 486 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 FGF19O95750 216 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 DRD1P21728 446 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 ADD1P35611 737 aaKnown RBP8.04□□□□□ -1.12
RBM39-218ENST00000449489 DPP6P42658 865 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 IRX4P78413 519 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 SIM1P81133 766 aaPredicted RBP8.04□□□□□ -1.12
RBM39-218ENST00000449489 AMPD2Q01433 879 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 NECTIN1Q15223 517 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 EPHA7Q15375 998 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 TEAD2Q15562 447 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 SPDYCQ5MJ68 293 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 KIAA1211LQ6NV74 962 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 C19orf48Q6RUI8 117 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 CYP4X1Q8N118 509 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 FAM177A1Q8N128 213 aaPredicted RBP8.04□□□□□ -1.12
RBM39-218ENST00000449489 BEST2Q8NFU1 509 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 EXOC4Q96A65 974 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 LRRC3BQ96PB8 259 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 OXCT2Q9BYC2 517 aaPredicted RBP8.04□□□□□ -1.12
RBM39-218ENST00000449489 SLITRK6Q9H5Y7 841 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 ZSWIM4Q9H7M6 989 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 SNTG2Q9NY99 539 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 ZMYM5Q9UJ78 669 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 VAV3Q9UKW4 847 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 ASB3Q9Y575 518 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 FLNCQ14315 2725 aa8.04□□□□□ -1.12
RBM39-218ENST00000449489 NID2Q14112 1375 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 TTC24A2A3L6 582 aaPredicted RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 LCE2BO14633 110 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 N4BP3O15049 544 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 TBX3O15119 743 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 RECQL4O94761 1208 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 LYPLA2O95372 231 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 TDP2O95551 362 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 MYL4P12829 197 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 GLRA2P23416 452 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 HOXD12P35452 270 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 CLCNKBP51801 687 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 SCAPQ12770 1279 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 TWF1Q12792 350 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 PLD1Q13393 1074 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 UAP1L1Q3KQV9 507 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 USP39Q53GS9 565 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 XKR9Q5GH70 373 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 CREB3L3Q68CJ9 461 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 CDCA2Q69YH5 1023 aaPredicted RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 FSTL4Q6MZW2 842 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 DHX32Q7L7V1 743 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 CDR2LQ86X02 465 aaPredicted RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 TMC8Q8IU68 726 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 LSM14AQ8ND56 463 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 C1orf216Q8TAB5 229 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 CCDC26Q8TAB7 109 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 BPIFB1Q8TDL5 484 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 ASAP3Q8TDY4 903 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 ACDQ96AP0 544 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 FAM83CQ9BQN1 747 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 LXNQ9BS40 222 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 MKNK1Q9BUB5 465 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 NUSAP1Q9BXS6 441 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 RNF26Q9BY78 433 aaPredicted RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 LSG1Q9H089 658 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 CCDC86Q9H6F5 360 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 KCNMB3Q9NPA1 279 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 ANKEF1Q9NU02 776 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 THG1LQ9NWX6 298 aaKnown RBP8.03□□□□□ -1.12
RBM39-218ENST00000449489 FBXL5Q9UKA1 691 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 PTPRDP23468 1912 aa8.03□□□□□ -1.12
RBM39-218ENST00000449489 NOTCH2Q04721 2471 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 KLF18A0A0U1RQI7 1052 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 A0A1W2PRU2 124 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 TNFRSF10BO14763 440 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 DCLK1O15075 740 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 XRCC6P12956 609 aaKnown RBP eCLIP8.02□□□□□ -1.13
RBM39-218ENST00000449489 GJA1P17302 382 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 IGFBP6P24592 240 aaPredicted RBP8.02□□□□□ -1.13
RBM39-218ENST00000449489 MCM2P49736 904 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 NNTQ13423 1086 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 DCAF4L1Q3SXM0 396 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 XKR4Q5GH76 650 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 PEAR1Q5VY43 1037 aaPredicted RBP8.02□□□□□ -1.13
RBM39-218ENST00000449489 PPP4R3AQ6IN85 833 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 SLC23A3Q6PIS1 610 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 CCNI2Q6ZMN8 369 aaPredicted RBP8.02□□□□□ -1.13
RBM39-218ENST00000449489 RASSF3Q86WH2 238 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 CHCHD4Q8N4Q1 142 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 C3orf58Q8NDZ4 430 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 ADAMTS14Q8WXS8 1223 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 ADPGKQ9BRR6 497 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 CXCL16Q9H2A7 254 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 PDZD7Q9H5P4 517 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 CYLDQ9NQC7 956 aa8.02□□□□□ -1.13
RBM39-218ENST00000449489 DDX25Q9UHL0 483 aaKnown RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms