RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 ABCB6Q9NP58 842 aa17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 PANK4Q9NVE7 773 aa17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 THG1LQ9NWX6 298 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 RBAKQ9NYW8 714 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 NDRG2Q9UN36 371 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 PCDHB5Q9Y5E4 795 aa17.59■□□□□ 0.41
CTDSP1-204ENST00000443891 MYBPHLA2RUH7 354 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 STX6O43752 255 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 HUS1O60921 280 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 AMPD3Q01432 767 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 SURF1Q15526 300 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 DPH6Q7L8W6 267 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 SYNPOQ8N3V7 929 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 BPIFB1Q8TDL5 484 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 USP28Q96RU2 1077 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 HINFPQ9BQA5 517 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 GDAP2Q9NXN4 497 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 PATJQ8NI35 1801 aa17.58■□□□□ 0.4
CTDSP1-204ENST00000443891 VPS13AQ96RL7 3174 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 EP300Q09472 2414 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 K7ELQ4 463 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 PPP6R2O75170 966 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 PAPSS2O95340 614 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 CSH1P0DML2 217 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 CSH2P0DML3 217 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 CHRNB1P11230 501 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 ATF6P18850 670 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 SDHBP21912 280 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 KPNA1P52294 538 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 RBP5P82980 135 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 TFAMQ00059 246 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 MYL7Q01449 175 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 CEBPZQ03701 1054 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 KCNA1Q09470 495 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 SPEM1Q8N4L4 309 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 TTC9BQ8N6N2 239 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 CELF5Q8N6W0 485 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 C1orf127Q8N9H9 656 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 ZNF396Q96N95 335 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 KIF9Q9HAQ2 790 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 IL21Q9HBE4 155 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 KIAA1586Q9HCI6 787 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 UXTQ9UBK9 157 aaPredicted RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 AGAP1Q9UPQ3 857 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 R3HCC1Q9Y3T6 440 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 F5P12259 2224 aa17.57■□□□□ 0.4
CTDSP1-204ENST00000443891 COL4A2P08572 1712 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 ITGB3P05106 788 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 CCNE1P24864 410 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 POLR2BP30876 1174 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 LHX1P48742 406 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 RPL10AP62906 217 aaKnown RBP17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 STK38Q15208 465 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 FAM173BQ6P4H8 233 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 CNNM4Q6P4Q7 775 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 LRRTM3Q86VH5 581 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 GPD1LQ8N335 351 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 TOP6BLQ8N6T0 577 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 LINC00301Q8NCQ3 95 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 RSPRY1Q96DX4 576 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 LPIN3Q9BQK8 851 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 KBTBD4Q9NVX7 518 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 ABI2Q9NYB9 513 aaPredicted RBP17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 TBC1D7Q9P0N9 293 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 NCDNQ9UBB6 729 aa17.56■□□□□ 0.4
CTDSP1-204ENST00000443891 NCANO14594 1321 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SPTLC2O15270 562 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 EIF3DO15371 548 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SOAT2O75908 522 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 YEATS4O95619 227 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 TMEM191BP0C7N4 346 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 TDGF1P13385 188 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 PCSK1P29120 753 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CNR2P34972 360 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CXCL12P48061 93 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CASP5P51878 434 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SNRPFP62306 86 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 MYO1EQ12965 1108 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 PUM1Q14671 1186 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 STXBP5Q5T5C0 1151 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 KIAA2013Q8IYS2 634 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CMTM8Q8IZV2 173 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 PDCL2Q8N4E4 241 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CXorf38Q8TB03 319 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SAAL1Q96ER3 474 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 FUBP3Q96I24 572 aaKnown RBP eCLIP17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 ANKRD36BP1Q96IX9 119 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 CEP295NLQ96MC4 621 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 BACH2Q9BYV9 841 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 MAGEF1Q9HAY2 307 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SMG5Q9UPR3 1016 aaKnown RBP17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 TSC2P49815 1807 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 OTOGLQ3ZCN5 2332 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 SPTBN4Q9H254 2564 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 ZNF292O60281 2723 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 COL4A3Q01955 1670 aa17.55■□□□□ 0.4
CTDSP1-204ENST00000443891 ZNF233A6NK53 670 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 SPECC1L-ADORA2AF8WAN1 911 aa17.54■□□□□ 0.4
CTDSP1-204ENST00000443891 GABRDO14764 452 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms